Phasianus colchicus (Ring-necked pheasant): 116240394
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Entry
116240394 CDS
T07365
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116240394 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116240394 (HBS1L)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116240394 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
GIP1_N
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
116240394
NCBI-ProteinID:
XP_031466603
Ensembl:
ENSPCLG00000002154
UniProt:
A0A669P4T9
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYD
YEDTEDTADYFTPNHQLTEVDRARLSSCLDQMREVLAESVPDQAMVQAVLDSKFDVQKAL
DLVLSQDSKQNVKTKDEDAVVVRKTTKGKSRDSQSARMESEIVPKITKMTVSGKKQSMGF
EVPCMVTEENGHVNTPQKGLPIEEASVTPGVLEAVSKPALSSHVVQVSEEQNTVPTPVKK
SSKTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTKWYQGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPVKVCTRFRARILIFNIEIPVTKG
FPVLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLSKGQNALIELETQRPVAVELYK
DFKELGRFMLRYGGSTIAAGVITEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggctacaactacgacgaagattttgaagatgatgat
gtgtatggccagtcagtagaagatgattattgcatttctccttccacggcagctcagttt
atctactcaagacgagacaaaccagcaacatttgctgagccattggaagaggaatatgac
tatgaggatacagaagatactgctgattactttacgcccaatcatcagttgactgaagtt
gatagagctcgtcttagttcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagaccaagcaatggtgcaagcagtactggatagtaaatttgatgtacagaaggctttg
gatcttgtgctttcacaagacagtaagcaaaatgtgaagaccaaggatgaggatgctgtg
gttgtaagaaagacaacaaaaggaaaatcaagggattcccagtcagccagaatggaatct
gaaattgtgccgaaaattaccaaaatgacagtgtctggaaagaaacagtcgatgggattt
gaggttccatgtatggttactgaagaaaatggccatgttaacacacctcagaaaggactg
ccaattgaagaagccagtgtaactcctggggttcttgaggcagtatcaaaacctgctctt
tcatcccatgtagtgcaggtttcagaagagcagaataccgtgcctactccagtaaaaaaa
tcaagcaagacaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcaactacttaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcacctactctacctcttgggaaatgtgaacaaaagaactatgcacaaatatgaacag
gaatcaaagaaggctggcaaagcttcatttgcatatgcgtgggtcttggatgaaactggg
gaagaaagagaaaggggagtaacaatggatgtgggtatgaccaaatttgagacgaagact
aaagtaattactctgatggatgctccaggccacaaagactttattccaaatatgatcaca
ggagctgcacaggctgatgtggctattttggttgtggatgccagcagaggagaatttgaa
gcgggatttgagacaggtggacaaactcgagaacatggattattagtgcgctctcttgga
gtcacgcagttagctgttgcagtcaataaaatggaccaggtcaattggcaacaagaaaga
ttccaggaaattaccagtaagcttggccagtttcttaaacaagctggcttcaaggaatct
gatgtggcttatattccaacaagtggtcttggtggtgaaaatctagtcacaagaagtcag
tcaagtgacctcacaaaatggtatcaagggaagtgtttgttagagcaaattgattctttc
aagccaccgcagagatcagtggacaaaccatttagattgtgtgttgctgatgtttttaaa
gaccaaggatcaggattctgtgtgactggaaaaatagaagctggctatattcaagttgga
gaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacacttcac
gatgaaccggttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgttggctgtgtattttgtgatcccaaggaacctgttaaagtt
tgcactcgattcagagctcggattctcatcttcaatattgagattccagtcaccaaagga
ttccctgtacttttacactatcaaacagtaagtgaacctgctactattagaagattgttg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttcctttctaaa
ggacagaatgctttaatagaactagaaactcaaaggccagttgctgtagagttgtataaa
gactttaaagagctagggaggtttatgttacgctacggtggttccactattgctgcagga
gttatcacagagattaaagaatga
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