Phasianus colchicus (Ring-necked pheasant): 116240593
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Entry
116240593 CDS
T07365
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X1
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoc03041
]
116240593 (DDX43)
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116240593 (DDX43)
Spliceosome [BR:
pcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116240593 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_2
Mur_ligase_C
Motif
Other DBs
NCBI-GeneID:
116240593
NCBI-ProteinID:
XP_031466883
Ensembl:
ENSPCLG00000016433
UniProt:
A0A669QYY0
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSDWEESGDEAAGVPRPSPSSTVAAAPLWQPPTNPLPSSSPTEGELERRGSEWRQEAAAS
VGGEERECAVAGSRRGRAARWRHPRAAAGRAQEAGEPLCFLISSALAGVLIGRGGAKIKE
LEESSGSRIQVIKGASEAEVKIFGSVAVQNKAKVLIDETVVSCRQSNSRGKSLDVINPEN
TPKKPVINWASLRENRAKYEAMKWAGLPPIEKNFYKESSRTASMSPREVELWRKENNNII
CDDLKEGEKRCIPNPVCKFEDVFEQYPDIMANIRKIGFQKPTPIQSQAWPIILQGIDLIG
IAQTGTGKTLAYLMPGFIHLASQPIPKDERGGPGMLVLAPTRELALQVEAECLKYTYKGF
KSICIYGGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADKMLDM
GFEPQIMKILIDVRPDRQTVMTSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQK
VIVINEEEKKAFMENFIDSMKPKDKAIIFVGKKSTADDIASDLGVKGVPVQSLHGDREQC
DREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRT
GKAVTLVTKKDWKAASELIDILQRANQVVPDELISMAERYKQHQIRKEMEKDILRPQRK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactgggaggagagcggtgacgaggccgcgggggtaccgcggccgtcgccatct
tccacggttgccgccgcgcccctgtggcagccgccgaccaaccctctgccgagcagctcg
ccgacagagggcgagctggaacgaaggggctcggagtggcggcaggaggcggcagcgagc
gtcggtggagaggaacgggaatgcgccgtggctggcagccgtcgaggtcgggcagcgcga
tggcggcacccgagagccgccgcaggcagagctcaggaggctggggagcctctctgcttc
ctcatcagcagcgccctggccggggttttgataggtcggggaggagctaaaataaaagaa
cttgaggaatcttcgggttctaggatacaggttattaagggagcctctgaagcggaagtg
aagatttttggcagcgttgctgtgcagaacaaagccaaggtgctgattgatgaaacagtt
gtaagctgtagacaaagcaactctagaggaaaatccttagatgttatcaatcctgagaat
actccaaagaaacctgtgatcaactgggcctctcttcgagaaaacagagctaaatatgag
gctatgaagtgggcaggcctgcctccaattgagaaaaacttctataaagaatcatcaagg
actgcatctatgtcaccacgagaagtagaactgtggcggaaagaaaataacaatataatt
tgtgatgacttaaaagaaggtgaaaagcgctgcattcccaatcctgtttgtaaatttgaa
gatgtatttgagcaatatcctgatattatggctaacataaggaaaattggttttcagaaa
cctacaccaattcagtcccaggcatggccaatcatactacaaggaattgatcttattggc
atagcacagactggtaccgggaagacattagcttacttaatgcctggattcattcatttg
gcttcacaaccaatacccaaagacgagcgtggaggaccaggaatgttggtcctcgctcct
acccgagaactggcacttcaagtagaggcagagtgcttgaagtatacatacaaaggattt
aaaagtatctgcatatatggtggtggggaccggaaagcacagataaacgtggtgaccaaa
ggtgtggatattgttattgctactcctgggagactgaatgatcttcaaatgaacaacttc
ataaacttgaagagcataacatacttggttttagatgaggctgacaaaatgctggatatg
ggatttgaacctcagataatgaagatcttaatagatgtgcggccagacagacaaactgtt
atgacaagtgctacttggcctgatggtgttcgtcgcctagcaaaatcctatttgagaaat
cccatgatcgtgtatgttggcactcttgacttagcagcagtaaatacagtagaacagaaa
gttattgttatcaacgaagaagaaaagaaagctttcatggaaaacttcattgactctatg
aagccaaaagataaggccatcatttttgttggaaagaagtctacagctgatgacatagca
agtgaccttggtgtcaaaggagttccagtgcagtctcttcatggtgacagagagcagtgt
gatcgagaacaggctttagatgacttcaagaaaggtaaagtcagaatcctggtagctact
gacttagcatcccgtggccttgatgtgcatgatattactcatgtttttaactttgacttc
cctcgcaacattgaggaatatgttcacagagtaggtcgtactggaagagcaggacgtact
gggaaggcagtaacgcttgtcactaagaaagactggaaggctgcatctgagctgattgat
attctgcaaagagcaaaccaagtggttcccgatgagcttatttcaatggcagaaagatac
aaacaacatcaaatcaggaaggaaatggaaaaggatatactaagacctcagagaaagtaa
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