Phasianus colchicus (Ring-necked pheasant): 116241085
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Entry
116241085 CDS
T07365
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116241085 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116241085 (ARID1B)
03021 Transcription machinery [BR:
pcoc03021
]
116241085 (ARID1B)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116241085 (ARID1B)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
Helix-turn-helix
ARID
116241085 (ARID1B)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116241085 (ARID1B)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116241085 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
116241085
NCBI-ProteinID:
XP_031467563
Ensembl:
ENSPCLG00000002389
LinkDB
All DBs
Position
Unknown
AA seq
2287 aa
AA seq
DB search
MAHRAAPNGGSAAGGPSSEPALKEAGGGSAARSSSSSPPSSSSSSSSSSSSTPGSAMETG
LLPNHKLKSVGGDRPAAPPHHHRAHHPHHHAHHHHAHRPHHRHHAPPQPLNPFPPPPPQQ
PPPQHHPAQNSSGSLGGGGGGNNNGGGGGGAAQPGADMEQQQHGGKDGVLGAPAEPPQQP
PQQMLNKGADEEEMPGKMGEPIGGRYEHPGLGPLGGQQQPQQPPPSAGSGGGLGGGGGGG
GGGGGGGPSAVGVSEFNSYYGNAAPAAASSATASRAGPCFDQHGGQQSPGMGIMHPAAAP
NSMDPLQNSHEGYPNSQYNHYPPYGRGPGGGXXXPXAAAAAAGAVAGGGGGYGGSAAGYG
VLGSPRQPGGGMMMGPGGGAGLGKAASGAAAAAGGFARFSGQNQHPSGATPTLNQLLTSP
SPMMRSYGGGYPDYGGPGAPPQPQPQPQAAPAAPGSQQAAGMGMGKDMGAQYGAASPAWA
AAQQRNHPAMSPGSTAQPIGRTQGSPMDPMVMKRPQLYGMGNNPHSQAQQSSPYPGQSYG
PPGPQRYPVGMQGRAPAAMGGMQYPQQQIPPQYGQQGVSGYCQQGQQPYYNQQPQHLPPQ
AQYLSQAQQRYQAQQDMSQEGYGTRSQAPMAPGKPNHEDLNLIQQERPSSLPVEVLASED
ATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPG
GPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQDRGFM
AGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSFQQSNSSGTYGPQMSQYGPQGNY
SRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGTMPLGRMPSAGMQSRPFPGNM
SSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGNFPAMNQSGIM
GSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPLPLKADGK
EEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPK
TPSSPKSSSSTTTGEKITKVYELGNEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDL
FRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQYIQYLFAFECKIERGE
EPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPH
GQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMMGRMPYEPNKD
PFGGMRKVPGSNEPFMTPGQMPNSGIQEMYNQSPSGAMSNMSMSQRQQFSYGSGYDRRHE
PYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQ
QEMYNQYSNAYSGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQSSSSTEG
PQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQR
QPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSM
KMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWR
VMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGIL
MEYEVGDPGHKALDHKSAKKDDSQSLAEDTGKEENDECIDCFDEEEEEGDEENVEGEEKS
IVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSGLLHWQLG
GGDTTEHIQTHFESKMEIPPRRKAPPPSNSPSKKKDLEGKGEFEEQQEKSITATIDDVLS
ARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLA
KRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEED
KGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAE
AQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDR
KNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHM
QPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDV
LFQIGQL
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggcccaccgcgccgctcccaacggcggcagcgcggccggcggcccctcctcggagccg
gcgctgaaggaggccggcggcggctccgcggcgcgctcctcgtcgtcctcgccgccttcc
tcctcctcctcctcctcctcctcctcctcctccaccccgggctcggccatggagacgggg
ctgctccccaaccacaagctgaagagcgtcggaggcgatcgccccgccgcgccgccccac
caccaccgtgcccaccacccgcaccaccatgcccaccaccaccatgcccaccgcccgcac
caccgccaccacgctccgccgcagccgctgaaccccttcccgccgccgccgccgcagcag
ccgccgcctcagcaccatcccgcgcagaatagcagcggcagcctcggcggcggcggcggc
ggcaacaacaacggcggcggcggtggcggcgctgcgcagcccggcgcagacatggagcag
cagcaacatggaggaaaagacggcgtcctgggcgctccggccgagccgccgcagcagccg
ccgcagcagatgctgaataaaggcgccgacgaggaggagatgcccggcaaaatgggcgag
cccatcggcggccgctacgagcaccccggcttgggacccctgggcggacagcagcagccc
cagcagccgcccccgagcgccgggagcggcggcggcctcggcggcggcggcggtggcggc
gggggaggcggcggcggcggcccctccgcggtgggtgtctcggagttcaacagctattat
ggcaacgctgcccctgccgctgccagcagcgctacggcgagccgcgccgggccttgcttt
gatcaacatggcggacaacaaagccccgggatggggataatgcaccccgcggcggccccc
aacagcatggaccccctgcagaactcgcacgaagggtaccccaacagccagtacaaccac
tacccgccctacggccgcgggcccggcggcggnnnnnnnnnnccgntggcggcggcggcg
gcggcgggagccgtggcgggcggcggcggcggctacgggggctcggcggcaggctacggg
gtgctgggctcgccccggcagccgggcggcggcatgatgatgggccccggcggcggggcc
ggcctcggcaaggctgcctccggcgcggcggcggcggccggcggcttcgcgcggttctcg
gggcagaaccagcacccgtccggggccaccccgaccctcaaccagctgctcacgtcgccc
agccccatgatgcggagctacggcggcggataccccgactacggcggccccggcgccccg
ccgcagccccagccccagccccaggcggcgccggccgccccgggcagccagcaggcagcg
ggcatgggcatgggcaaggacatgggcgcgcagtacggggcggccagcccggcctgggca
gcggcgcaacaaaggaaccacccggcgatgagccccggcagcaccgcgcagcccatcggc
aggacgcagggcagcccaatggatccaatggtcatgaagagaccccagctatatggcatg
ggcaataaccctcactcccaggcgcagcagagcagcccctaccctgggcagtcctacggc
cctcccggcccccagcgctacccagtggggatgcagggacgagccccggcagccatggga
ggaatgcagtatccacagcaacagataccgccgcagtatggtcagcaaggcgtgagtggc
tactgccagcagggccagcagccatactacaaccagcagccgcagcacctgccgccccag
gcacagtatctgtcacaggcccagcagagataccaggcccagcaggacatgtctcaggaa
ggctatggaaccagatctcaagcccctatggccccaggaaagcctaaccatgaagacttg
aacctaatccagcaagaaagaccatcgagcttaccagttgaagtcttggcctccgaggat
gctacatttggacacaaggatttgtctggatccattgatgatttgccgactggaactgaa
gcaacgctgagctcagctgttagcgcatcaggctctacaagcagccaaggggagcagagc
aaccctgcacagtctccattctcccctcatgcttcaccacatctctctggcatccccggg
ggcccatcgccttcccctgtaggctctcctgttggaagcaaccagtctaggtctggtccc
atttctccagcaagtattccaggcagtcagatgccaccacagcctcctggcagccagtca
gaatccagctcccaccctgctttgagccagtcaccaatgccacaggaccgaggttttatg
gcaggcatacagaggaacccccaaatgtcacagtatggacctcaacaaactggaccttcc
atgtcaccacacccctcacctggtggccaagtgcatcctggaattggtagctttcagcag
agtaattcaagtggtacttatgggcctcagatgagccagtatggaccacaaggaaactac
tccagaccaccaacatacagtggcgtgcccaacacaagctacagtggccctggacccggc
atgggtataaatgccaacagccagatgcatggacaggggccaagccagccctgtggtacc
atgcccctcggccggatgccatcagctgggatgcagagcagaccatttcctggaaacatg
agcagtatgacccccaactctcctggcatgtctcagcagggaggccccggaatgggccca
cccatgccaactgtgaaccgtaaggcacaggaggcggctgctgcagtgatgcaggctgct
gcaaactccgctcagagcaggcaaggcaattttcctgccatgaatcagagtggtattatg
ggttccagctccccctacactcagccgatgaacaacagctcgggcttgatgaacccacag
gctcctccatacagcatggcacctaacatggtgaacagttcaacagcacctatgggtctt
gcagatatgatgacacctggtgagtccaaactaccccttcctctcaaagcagatggcaaa
gaagaaggagcccctcaacctgagagcaagtcaaaggatagctacagctctcagggtatt
tctcagcccccaaccccaggcaacctgccagtcccttccccaatgtccccaagctctgct
agcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggctggccaaag
actccatcaagccctaaatcaagttcctccaccacaactggagagaagatcacaaaagtc
tacgaacttggcaatgaaccagagcgcaagatgtgggtagaccggtatctcacgttcatg
gaggagaggggcacacctgtggccagtctgccagctgtgggcaagaagcccttggacctg
ttcaggctgtatgtctgtgtcaaagagattggaggtttagcgcaggttaataaaaacaag
aagtggcgcgagcttgcaacaacattgaacgttggcacttcgagcagtgcagccagctcc
ctgaaaaaacagtacattcagtacctgtttgccttcgagtgcaagatcgagcgaggggag
gagccccctccagaagtcttcagcactggagatactaagaaacaacctaagattcagccg
ccatctcctgctaattctggttccttgcaaggcccacagactccgcagtctactggcagt
aattccatgacagaagtgccaggcgatttgaagcctccaacaccagcatcaacacctcat
ggacagatgacacctatgcagggtggcagaaacagcgcagttagtgtgcatgatcccttt
tctgatgtaagtgattcagcattcccgaagcgaaactccatgacgccaaatgcaccatac
cagcagggaataaacatgccagatatgatgggaaggatgccatacgagccgaataaagat
ccttttggtggaatgagaaaagtgcctggaagcaacgagcctttcatgacccctggacaa
atgcctaacagtggaatacaggaaatgtataaccagagtccatctggagccatgtccaac
atgagcatgagccagcgacagcagttctcttatggaagtggctatgacaggaggcacgaa
ccatatgggcagcagtatccaggacaaggacctccctcaggacagccaccatatggagga
catcaacctggaatgtatccacagcagcagaactacaagcgacacatggatggcatgtat
gggcctccagccaaacgccacgaaggggatatgtataacatgcagtatggcaaccagcaa
caagaaatgtataaccagtacagcaatgcttactctgggcctgataggaggcctatgcag
ggacaatatccgtatccgtataacagggagaggatgcagggcccaggacaaatgcagcag
catggaatacctccccagatgattggtggccccatgcagtcgtcgtcctccactgaaggt
cctcagcagaacatgtggccaacacgaaacgatatgccttacccttaccagaataggcaa
ggtccaggaggccctgcacaggccccaccgtatccagggatgaatcgcactgatgatatg
atggtacctgaccagaggataaaccacgagagtcagtggccttctcatgtcaaccaacgt
cagccttcttatatgtcatcctcagcctccatgcagcctatcactaggcctcctcagtca
tcctaccagacaccaccctctatgccaaatcacatctctagagctccgagtccagcatcc
ttccaacgctctttggaaaaccgtatgtctccaagcaagtctcctttcctgccctccatg
aagatgcaaaaggttatacccacagttccagtgtcacaggtcacaggacctccaccccaa
ccaccaccaataaggcgagaaattaccttccccccaggctctgtagaagcatcgcaacca
gtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcctgaggcctggaga
gtgatgatgtcccttaaatctggtcttttggctgaaagtacctgggcgctagacactatt
aatattcttctatacgatgatagcactgttgctacattcaacctctctcagttgtctgga
tttcttgagcttttagtagaatattttagaaaatgcctgattgacatttttggaatcctt
atggaatatgaagtgggagatccaggtcacaaagcacttgatcacaaatcagccaagaaa
gatgatagccagtccttggcagaggatactggaaaagaggagaacgacgaatgtattgac
tgttttgatgaagaggaggaggagggggatgaggaaaacgtagaaggagaagaaaagagc
attgttttttccactcctggtgccattgctgatccaagcgaaaggccaaaacaagccagt
aaatttgacaagctgccaataaagattgtaaagaaaaataatctatttgttgttgatcga
tctgacaaacttggacgcgttcaggaatttgatagtggacttctccactggcagcttggt
ggtggtgacacaactgagcatatccagactcacttcgaaagcaagatggagattcctcca
cgcaggaaagcccctcctccctcaaactctccaagcaaaaagaaagaccttgaggggaaa
ggtgaatttgaggaacaacaagaaaaaagtataacagcaaccattgatgatgtcctctca
gctcggccaggagcattgcctgaagactcaaactctggttcccaaacagagagcagtaaa
tttccctttgggatccatcaagccaaaagccaccggaatattaaactgctagaggatgag
ccaaggagccgggatgagactcctctatgcaccataactcactggcaagactccttggcc
aaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcctggcaatgac
accgaaatgtccaaacatccaggcttggtgctgatcctgggaaagctgatccttcttcac
catgagcatccagaaagaaagcgagcgccgcagacttacgagaaggaggaagaggaggac
aaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgaggtcttgagggat
aatacattggtcacgttagccaacatttctgggcagctagacttgtctgcttacacagaa
agcatctgtttgccaattttggatggcttgctgcactggatggtgtgcccatctgcagag
gcacaggatccttttccaaccgtggggcccaactcagttctttcgcctcagagacttgtg
ctggagaccctgtgtaagctcagtatccaggacaataatgtggaccttatcttggccacc
cccccattcagtcgtcaggagaaactctacgctactttagttaggtacgttggagaccgc
aaaaacccggtctgccgagaaatgtccatggcgctcttatcgaaccttgcccagggggac
acattagcagcaagggcaatagctgtgcagaagggaagcatcggaaacttgataagcttc
ctggaggatggggtcactatggcccagtaccagcagagccagcataacctcatgcacatg
cagcctccgcctctggagccacctagcgtagacatgatgtgcagggcagccaaggccttg
ctggccatggctagagtggacgagaaccgctcagagttccttttgcacgagggtcgtttg
ctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatctgtgatgta
ctttttcagattgggcagttatga
DBGET
integrated database retrieval system
