Phasianus colchicus (Ring-necked pheasant): 116241721
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Entry
116241721 CDS
T07365
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116241721 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116241721 (APEX1)
Enzymes [BR:
pcoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116241721 (APEX1)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116241721 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
116241721
NCBI-ProteinID:
XP_031468120
LinkDB
All DBs
Position
Unknown
AA seq
183 aa
AA seq
DB search
HPKSPISSFPTPGIEEHDAEGRVLTAEFPSFYIVSAYVPNSGRGLTRLQYRQRWDEAFKS
FLLGLDSQKPVVLCGDLNVAHQEIDLRHPKNNRRSAGFTQEERDGFGALLDAGFLDSFRE
LYPNLPHAYTFWTYMGAARERNVGWRLDYFLLSKRLGSALCDSKIRSTAMGSDHCPITLY
LAV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
caccccaaatcccccatttcctccttccccaccccaggcatagaagaacacgacgccgag
ggccgcgtcctgacggccgaattcccttctttttacatcgtttccgcctacgtccccaat
tcaggccggggtttaacccgcctccaataccgccaacgttgggacgaagcctttaaaagt
ttccttttgggcttggattcccaaaaacccgtggttctttgcggggatctgaacgtggcc
catcaagaaatcgacctcaggcacccgaaaaacaaccgacgttcggccggtttcacccaa
gaggagagggatggattcggggctttgctcgacgccggcttcctggattcgtttcgggag
ctttaccccaatttaccccacgcttacaccttctggacctacatgggggcggccagggaa
cgcaacgtgggctggaggttggattatttcctgctgtccaagaggttggggtcggcgctg
tgcgattccaagatccggtccacggccatgggaagtgatcactgccccattactctttac
ctggctgtgtag
DBGET
integrated database retrieval system
