Phasianus colchicus (Ring-necked pheasant): 116242255
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Entry
116242255 CDS
T07365
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pcoc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116242255 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116242255 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoc02000
]
116242255 (NPC1)
Transporters [BR:
pcoc02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
116242255 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
ACR_tran
MMPL
Motif
Other DBs
NCBI-GeneID:
116242255
NCBI-ProteinID:
XP_031468801
Ensembl:
ENSPCLG00000021810
UniProt:
A0A669QYK8
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MGGPQGSPGPGTRRLLVFLLLLLLSPAQVLPQQCVWYGECGIASGDKRYNCAYDGPPIAL
PKDGYDLMQELCPGLFFGNVSTCCDFLQLQTLKNNLQLPLQFLSRCPSCFYNLINLFCEL
TCSPNQSEFLNVTSTIPYYDPVSKENKSSITELQYFIGERFANEMYNACRDVEAPSSNVK
ALGLLCGKDAKDCNATNWIEYMFSKDNGQTPFSIIPIFSDVPVHGMNPMNNATKGCNESV
DDSTGPCSCQDCSIVCGPKPQPPPSPVPWLLFGLDAVYIIMWISYMGFLLVFFALVFGVW
CYRRRHFVSEYTPIDSNVAFSVNSHRDNGKITCGERLGERFENGLRMTFTSWGAFCVRNP
RPVILFSVVFIAMCCSGFVYIKATTNPVDLWSAPSSQARKEKEYFDKHFGPFFRTEQLII
QAPNSRPDIYSPYPSGADVPFGPPLNKDILHQVLDLQDAIVNIVASFDNETVMLKDICVA
PLAPYNNNCTILSVLNYFQNSHSVLDHTVGDEFFVYADYHTHFLYCVRAPASLNDTSLLH
DPCLGAFGGPVFPWLVLGGYDGDNYNNATALVITLPVNNYYNDSKKIMKALAWEKEFINF
LKNYDNPNLTISFSAERSIEDEINRESRSDVSTVLISYIVMFVYISIALGHIQSWGRLLV
DSKISLGIAGILIVLSSVACSIGIFSYFGVPVTLIVAEVIPFLVLAIGVDNIFIIVQTLQ
RDERLEGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVRTFSLFAGMAVLI
DFILQVTCFVSLLGLDIRRQERNRLDILCCIKGSEEMGGVQRSESILFLFFKNLYSPYLL
KDWMRPIVIALFVGVLSFSTAVIHNVEIGLDQSLSMPDDSYVVNYFKQLSKYMHAGPPVY
FVLEEGHNYTSLEGQNMVCGGTGCNNDSLVQQVFNAAEISSYTRIGYAPSSWIDDYFDWV
KPQSSCCRVYNTTGQFCNASVTDPSCTRCRPLTQEGKQRPQGEDFMTFLPMFLSDNPNPK
CGKGGHAAYSSAVDLINNKTDVGATYFMTYHTVLKKSSDYIDAMKKARNIADNITETMGI
KEKNYRVFPYSVFYVFYEQYLTIVNDAIFNLCISLGSIFLVTAVLLGFEIWAAVVVTVTI
AMIIVNMFGVMWLWGISLNAVSLVNLVMSCGIAVEFCSHVTRAFTVSTKGSRVERAEEAL
SHMGSSVFSGITLTKFGGIVVLAFSKSQIFKIFYFRMYLAMVLLGATHGLIFLPVLLSYI
GPSVNKAKTRAAQERSRGTERERLLYF
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggggggcccgcaaggcagccccgggccgggcacccgccgcctgctcgtctttctcctc
ctgctgctgctgtccccagcacaggtacttccacaacagtgcgtctggtacggagaatgt
ggaattgcatctggagacaagagatacaactgtgcttatgatggaccacctatagctcta
ccgaaggatggctatgacttgatgcaggaactctgtccaggtttattctttggcaatgtt
agtacttgctgtgatttccttcagcttcagactttgaaaaacaacttgcagctgcctctg
cagtttctttccaggtgtccatcatgtttctacaacttgattaacctcttctgtgaactg
acttgcagtccaaatcagtctgagtttttgaatgttacaagcaccataccttattatgat
ccagtttcaaaagaaaacaagagtagcattacagagctgcagtacttcatcggagaacgc
tttgcaaatgaaatgtataatgcctgcagggatgttgaggctccatcaagtaatgttaag
gcattggggctgctgtgtggaaaggatgccaaggactgcaatgctaccaactggattgag
tacatgtttagtaaagataatggacaaactcctttcagcattattcctatcttttcagat
gttcctgtccatggaatgaatcctatgaacaatgctaccaaaggctgtaatgagtctgtg
gatgattcaacaggaccgtgcagctgtcaagactgttcaattgtttgtggtccaaaacct
cagccccctccatcacctgttccttggcttttatttggtttggatgctgtgtatatcatc
atgtggatctcttacatggggtttctacttgtattttttgctctagtttttggagtctgg
tgttacaggaggcggcattttgtctctgagtatacaccgattgacagtaatgtagccttt
tctgtgaactctcatcgtgataatgggaaaattacctgtggtgagaggcttggtgaaagg
tttgagaatggcctaaggatgacatttacatcatggggtgctttctgtgtcagaaatcca
cgcccagttatcctcttctctgtggtctttattgctatgtgctgttcaggctttgtatat
attaaagcaactacaaaccctgtagatctctggtcagctccaagcagccaagcccgcaag
gagaaggaatactttgacaaacactttgggcctttctttcgtactgaacaacttattatt
caagccccaaacagccgtccagacatctattcaccgtacccatcaggagcagatgtgcct
tttggacctccactcaacaaagatattctccatcaggtgcttgatttgcaagatgctatt
gtgaacatcgttgcgtcttttgataatgaaactgtaatgctgaaagacatttgtgtggct
cctcttgctccctacaacaacaactgcactatattgagtgtactcaactacttccaaaac
agtcattctgttctagatcacactgtgggggatgagttctttgtctatgctgactatcac
actcacttcttatattgtgttcgggctccagcatcactgaatgacactagtttgcttcac
gatccttgcttaggagcatttggtggacctgtctttccatggctggtgttaggaggatat
gatggtgataactataataatgctactgctcttgttattactcttcctgttaataactac
tacaatgactcgaagaagataatgaaagccctggcatgggaaaaagagtttattaacttt
ttgaagaactatgataatccaaatttgactatatcattttctgctgaacggagcattgaa
gatgaaatcaatcgtgaaagcaggagcgatgtcagcactgttctaataagctacattgta
atgtttgtgtatatctccatagctctgggacatatccagagctggggaaggctgctggtg
gattcaaagatctccctgggcattgcaggcatcctgattgtcctgagctcagtggcatgt
tccataggcattttcagttactttggagtcccagtgacactgattgtggcagaagttatt
cccttcttggtgctggctattggggtggacaacatttttattatagtccagacacttcag
agagatgagcgtcttgagggtgaaactcttgataaacagattggcagagtcctgggagat
gtggcacctagcatgtttctctcatctttttctgaaactgtggcattcttcttagggaca
ctgtctaccatgccagcagttcgcacgttctccctgtttgctggaatggctgtgctcata
gattttatccttcaagtcacctgctttgtaagtctcctgggcttggatattaggcgccaa
gagaggaatagactagatattctgtgttgcatcaaaggcagtgaagaaatggggggagtc
caacgctccgagagcatcttatttctgttcttcaaaaacctgtattctccatatctgctt
aaggattggatgagaccaatagtgattgccttgtttgtgggtgttctgtcattcagtaca
gcagtgatacacaatgtagagattggactcgatcagtctctttcaatgccagatgattcc
tacgtagtgaattacttcaaacagctcagcaaatacatgcatgcaggtcctcctgtctac
tttgttctggaagaagggcacaactacacctctctggaagggcaaaacatggtgtgtggt
ggaacgggatgtaataatgattcacttgtccagcaagtcttcaatgctgcagaaattagt
agctacacgaggataggctatgccccatcatcctggattgatgactattttgactgggtg
aagccacaatcatcctgttgcagagtctacaatactacaggacagttctgcaatgcttca
gtcacagatccatcctgcactcgttgtcgaccactgactcaagaaggcaagcaaagacca
cagggtgaagacttcatgacatttttgccaatgttcctgtctgacaaccctaatcctaaa
tgtggcaaaggaggacatgctgcatatagctctgctgttgacttgataaacaataaaact
gatgttggggctacttattttatgacataccatactgtcctgaaaaaatcatctgactat
attgatgctatgaagaaagctcggaacatagcagacaacatcactgaaaccatgggcatc
aaagagaagaactatcgtgtgtttccttacagtgtgttttatgtcttctatgaacaatat
ttgacaattgtgaatgatgccatctttaacctctgcatctccttgggatcaatatttttg
gtgacagctgtgctgcttggatttgaaatatgggctgctgttgtggttacagtaactatt
gctatgataatcgtcaacatgtttggagtgatgtggctctggggcatcagcttgaatgca
gtttcattagtaaatcttgtcatgagctgtggcattgctgtggaattctgcagccacgtg
acaagagcattcactgttagtactaagggcagtagagtggagcgtgcagaagaagctctg
tctcacatgggcagttcagtcttcagtggaatcacactaaccaaatttggaggaattgta
gtactggctttttccaagtctcagatcttcaagatattctacttcaggatgtatctagct
atggttctgctgggagcaacacatggactaatatttcttccagttctgcttagttatata
ggtccatcagtaaataaagctaaaactcgtgctgcacaggagaggtctagaggcacagaa
cgagagagactcctctacttctag
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integrated database retrieval system
