Phasianus colchicus (Ring-necked pheasant): 116242269
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Entry
116242269 CDS
T07365
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116242269 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116242269 (TAF4B)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116242269 (TAF4B)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116242269 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
116242269 (TAF4B)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116242269 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
116242269
NCBI-ProteinID:
XP_031468816
Ensembl:
ENSPCLG00000020030
UniProt:
A0A669QSY3
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MSAPATAAAPVRLMPGGHPEQPPAGSPAGGPAPACGSPAAKVPGCPAPSAPSAGPPAVRA
AAAGGPRPLVVPKGPPAATIQLPANFQLPPGTVLIRSSNGQLMLVSQQAIARAQPQPQNN
TSVRLSVPTSTPAVRICAVQNSGTQLIKKAVPTPLKTLSQTTNAVTSTVQSPAVMQPAAA
TASVTAVTAVKPLSTGTPVKLPVTGPPAQSISQKAVSVKVEGTTVAQTSTSTEMLENVKK
CKNFLATLIKLASSSGPQATEMGQNVKNLVQNLLEAKIEPEEFTKKLYVELKSSPQPYLV
PFLKKSMLALRQLMPNAQSFIQQCMQQPALTQEAVSTCTSALTPSTAVVTSPVATNPLPI
IKPVSASTTVTAAPVIKPVLSSASVTASLQAVKPVPASAVVTASLRPAPSVLTTAISTSG
LTAIQTVKPVFTSAVATTSLQSVKPVLVSTVASSAATPLQPLKPVMGTPISIKISQPNSI
VAQPVATQQVVKVKQLVVQQPSGTIVKQVSTLPQSSTLTLQTPVEKRMPLNTLVQTNQFP
AGSVLKQVTLPGNKILSLQASPLQKTKIKENGTTSFSRDEDDINDVTSMAGVNINEESAC
ILATNSELVGTVIRSCADEPFLFSEALQKKILNIGKRHDIMELNSDVVNLISHATQERLR
GLLEKLTVIAQHRISTHKGSDTYIVSSDTRAQLKFLEKLDHLEKQRKDEEEREMLLRAAK
SRSNKEDPEHLRLKQKVKEMQQLELAQMQQREANLTALAAIGPRKKRPLDSSNAGSGIEG
LNSNGIAPGSSNFSLTKQLLRPRITRVCLRDLIFCMEQEREMKHSLTLYRALLK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccggcgacggcggcggcccccgtcaggctgatgcccggcgggcacccggag
cagccgcccgccggctctcccgccgggggcccggctcccgcgtgcggcagccccgccgcc
aaggtgcccggctgcccggcgccctccgctccctccgcggggcccccggcggtgcgcgcg
gctgctgcggggggcccgcggccgctggtggtacccaaggggccgcccgccgccaccatc
cagctgccggccaacttccagctgcctccaggaactgttcttatcagaagcagtaatggt
caactgatgctagtatctcagcaagcaatagcacgagcacagcctcaaccacaaaataac
acaagtgtacgactgtctgtacctaccagcacacctgcagtcagaatatgtgctgtacag
aactctggcacccagttaataaagaaagcagtacctactcctttgaaaacattgtctcaa
acaacaaatgctgtgacttctactgttcagtcacctgctgttatgcagccagcagctgca
acagctagtgttactgcagttactgctgtaaagcctttgagtactggaacacctgtaaaa
cttccagttacaggaccacctgcacaatccatctcccaaaaggcagtctccgtgaaagta
gagggcacaacagtagcacagaccagcacttcaacagagatgctagagaatgtgaagaaa
tgcaagaatttccttgctacgctaataaaattggcatctagtagtggacctcaagccact
gagatggggcagaatgtgaagaatctggtgcaaaatctattggaagcaaaaattgaacca
gaagaatttacaaagaaactgtatgtagagctcaagtcttctccacagccgtatttagtt
ccttttctcaagaaaagtatgcttgccttacggcagctaatgccaaatgctcagagtttt
atccagcagtgtatgcagcagcctgctctgacccaagaagctgtttcaacttgtacttct
gcactaactccttccacagcagtggtaacctcacctgtagcaaccaatcctcttcccatt
ataaaaccagtgtctgcctccacaacagtcacagccgctcctgttataaaaccagtcctt
tccagtgcatcagtgacagcctctctgcaggctgtgaagcctgttcctgcctctgcagtg
gtgacagcctctcttcgtcctgcaccctctgtcctcaccacagcaatatcgacatcaggg
ctcactgctatccaaactgtaaagccagtcttcacctctgcagtagcaacaacatctctc
cagtctgtaaagccagtgctcgtctctacagtggcatcttcagcagcaacccctctccag
cctttgaaacctgtcatgggcacccccatcagtattaaaatctcacagcccaactccatc
gttgcgcagccagtggccactcagcaggtggttaaagtgaaacagttggtagtccaacaa
ccatcaggaaccattgtaaagcaagtatccacacttccacagtcctcaacgctgactctt
cagacacctgttgagaagaggatgccgctgaatacacttgttcaaacaaaccaatttcct
gctggctctgttctgaagcaagttaccctgccaggaaataaaatcctgtcgcttcaagcg
tctcctcttcagaaaactaaaataaaagagaatggaacaacatccttcagtagagatgaa
gatgacataaatgatgtgacttccatggctggagtcaacattaatgaagagagtgcatgc
attctggcaacaaattcagagctcgttggtactgtgatccgctcttgtgcagatgaacct
tttctgttttctgaagcacttcagaagaagattttgaacatcggtaaaaggcatgacatt
atggaacttaactctgatgttgtgaacttgatctcccatgctacacaggagagattacga
gggctcctagaaaaactaactgtaattgctcagcacagaatatcaacccataaggggagt
gatacatacattgtatctagtgacaccagagcacagctaaaatttcttgaaaagcttgat
cacctagaaaagcaaagaaaggacgaagaggaacgtgaaatgttgctacgagcagccaag
agccgttccaataaagaagatccagagcatctgcgtttaaagcagaaagtgaaagagatg
caacagttggaattagcacaaatgcaacaaagagaagctaacctcacagctttggcagcc
attggaccaaggaagaagagaccactggattcatcaaatgctggatctgggatagagggt
ttgaacagcaatggaattgctcctgggtcatcaaattttagccttacaaaacagcttctt
cgtccaagaataactcgtgtctgtctcagggacttgatattctgcatggaacaagagagg
gagatgaagcattctctaaccttgtaccgtgctcttctgaagtga
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integrated database retrieval system
