Phasianus colchicus (Ring-necked pheasant): 116242582
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Entry
116242582 CDS
T07365
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116242582 (CHD5)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116242582 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
116242582
NCBI-ProteinID:
XP_031469257
Ensembl:
ENSPCLG00000021019
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MRGPAAGEELLEEADNDEDVSEDDDGVLEGLEEFFAEEQVAAQKKKKCKKLKDGKAAKVK
RRKKEGSNDEISDNDEEIEEKSESEGSDYSPNKKKKKKLKEKKEKKNKRKKKDEEEDDDD
GGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMM
TVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQPALPPVIRKAKTK
EGKGPGVKKKIKSSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSAS
INSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAY
HLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEDEEEEGGEEEEDDHMEFCRVCKDGG
ELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAPLPS
ALPAPDAELALPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKN
DMDEPPAFDYGSGDEDSQREKRKNKDPHYAKMEERFYRYGIKPEWMMIHRILNHSFDKKG
DIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKL
KEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADE
MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES
RSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVV
DEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLE
EFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR
NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKL
MLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF
NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY
RFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDME
GMVSQGQRLTMPDAVTPFSDTLSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAA
ISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWE
KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE
DFEERPEGGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPP
QDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTR
IGVMSLVRKKVQEFEHVNGKYSTPDMILEGPESKKCNEMVSSDPNTPVPASPAHIHAGPL
ALAEKTDPPLGFQEEKDQVEQKSGRASDSQVPGSSEKVESEEYQENCESKEKLKEEKQDE
SEKAEPSPEPLGKDEGVQEKEKALEKPESNSSPGKGEDKEIKPEDTKVEEKEQSETQQNG
DKEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSSKIYDIWHRRHDYWLL
AGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQ
LRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLE
ELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNN
SFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggcggccggcgaggagctgctggaggaggcggacaacgacgaggacgtg
tcggaagatgatgacggggtcctggaagggctggaggagtttttcgccgaggagcaagtt
gctgcgcagaaaaagaagaaatgcaagaagctgaaagacggcaaggcggccaaagtcaag
aggaggaagaaagaggggagcaatgatgagatatcagacaacgatgaggagattgaggag
aaatctgagagcgagggaagtgactattcccccaacaagaagaaaaagaaaaaactgaag
gaaaagaaggagaaaaaaaacaaacggaaaaagaaggatgaagaggaggatgacgatgat
ggagggctaaaggagcctaagagctcagcccagctgatggaagaatggggccttgatgat
gtagattacattttctcagaagaagattaccatactcttactaattacaaggctttcagc
caatttctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatgatg
actgtgcttggtgccaagtggcgagagttcagtgccaacaacccgttcaagggcagctcg
gcggcagcagcagcggcagccgtggctgcagcagtggagactgtcacagtcgccccacca
ttggctgccagtccccagcagcctgccctgccccctgtcatcaggaaggcaaaaaccaag
gaaggcaagggtccaggtgtgaagaagaaaatcaagagctcgaaagatgggaagaaaaag
gggaagggaaaaaagatggcaggcctaaaattccggtttggaggaatccccagcaaaagg
aaaaagggctcctctagtgaagaggaagagcgggaggaatccgactttgacagtgccagc
atcaacagctcctccgtgcgctccgagtgctcggctggcctggggaagagagggaagagg
aggagaaagaaaaagaggattgaagaaggggatggctatgagacggaccaccaggactac
tgcgaggtgtgccagcagggaggggagatcatcctgtgtgacacctgtccgcgtgcctac
cacctcgtctgcctggaccctgagctggagaaagcccccgagggcaagtggagctgccca
cactgcgagaaggagggcatccagtgggagccaaaggaggaggaggatgaggaggaggaa
ggtggcgaagaagaggaggatgaccacatggagttctgccgtgtctgtaaggatggaggg
gagctgctgtgctgcgacacgtgcccgtcctcttaccacctgcactgcctgaacccaccc
ctgccagaaatcccaaatggtgaatggctctgccctcgctgtacatgccctcctttgaag
gggaaagtacaacgcatcctgcactgggcgtggaaggagcctccagccccactgccctct
gcgctgcctgccccagatgcggagctggctctgccactgccgaaggtgctggagggcatc
ccagagcgagagttcttcgtcaagtgggcagggctgtcctactggcactgctcctgggtc
aaggagctgcagctggagctgtaccacaccgtgatgtaccgcaactaccaaaggaagaac
gacatggatgagccaccagcctttgattatggctctggagacgaggacagccagagggag
aaaaggaagaacaaagaccctcactacgcgaagatggaggagcggttctaccgctatggc
atcaagcccgagtggatgatgatccaccgcatcctgaaccacagctttgataaaaaggga
gacatccattatctgatcaaatggaaagatctgccgtatgaccagtgcacctgggagatt
gatgagatagacatcccatactatgaaaacctcaagctcctctactggaatcacagggag
ctgatgctgggggaggacacacgtcctctgaagaagctgaacaagaaggggaaaaagctg
aaagaggagaagctagaaaagcctccagaaactcctcttgttgatcctacggttaagttt
gacaagcagccttggtacattgatgccacaggaggcacgctgcatccttaccagctggaa
gggctcaactggttgagattttcctgggcccaaggcactgatacgatcctggctgatgag
atgggactggggaagactgtgcagaccattgtgttcttgtattccctgtacaaggagggc
cactccaaagggccatacctggtcagtgccccgctctccaccatcatcaactgggagcgt
gagtttgagatgtgggcgcccgacttctatgtggtgacctacactggggacaaggagagc
cggtcggtcatccgggagaatgagttctcttttgaagacaacgccatccggagcggcaag
aaggtgttcaggatgaagaaggaagcccagatcaaattccatgtcctgctcacctcttat
gagctgatcaccatagaccaggcggtgctgggctccatcgagtgggcttgtctggtggtg
gacgaagcacacagactgaagaacaaccagtccaaattctttagggtattgaacagttac
aagatcgattacaagttactgcttactgggactccactccagaacaacctggaagagctc
ttccacctgctcaatttcctgactcctgagaggtttaataacctggagggcttcctggag
gagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctgggcccc
cacatgctgcgccggctcaaggcagatgtgttcaagaacatgccggccaagacagagctg
attgtcagagtggagctgagccagatgcaaaagaagtactacaagttcatactaacacgg
aattttgaagccctgaactcaaaaggtggggggaatcaggtctcactgctcaacatcatg
atggatctgaagaagtgctgtaaccacccatacctcttccctgtggccgctgtggaggcc
ccagttctgcccaatggatcctatgatgggaattctttggtcaagtcttctggaaaactg
atgctgctccaaaagatgctgaagaagttacgggatgggggtcacagagttctgatcttc
tcccagatgacgaagatgttggacttgctggaggacttcctggagtacgagggctacaag
tacgagcgcattgatgggggcatcaccggaggcctacgccaggaagccattgataggttt
aatgctcctggtgctcagcagttctgctttctcctctctacccgcgctggtggtctgggc
ataaaccttgctacggctgacacagtcattatttatgattctgactggaatccccacaat
gacatccaggcattcagcagagcacaccgcatcgggcagaacaagaaagtgatgatctac
cgctttgtgaccagagcctctgtggaagagcgcatcacccaggtggccaagaggaagatg
atgctcacccacctggtggtccgtcctgggctgggctccaagtcaggctccatgaccaag
caggagctggatgacatcctgaagtttgggacagaagagctcttcaaggatgatatggaa
ggcatggtgtctcagggacagcggctcaccatgccggatgccgtcacccctttctctgac
acgctgtccaccaaagggggagcagtgactcctggcatgaaaaagaagcatggtggcacc
ccaccaggtgacaataaggacgtggatgacagcagtgtgatccactacgacgatgctgct
atctctaagcttctggaccgaaaccaggatgcgactgatgacacggagctgcagaacatg
aacgagtatctcagctcctttaaagtggcccagtatgttgtgagagaagaggatggtgtg
gaggaggtggagcgagaaatcatcaaacaagaggagaatgtggaccctgactactgggag
aagctgctgcggcaccactatgagcagcagcaggaagatctggccaggaatttggggaag
gggaagagaatccgcaagcaggtcaattacaatgatgcctcacaagaggaccaagagtgg
caggatgagctctctgacaaccagtctgagtactccattggctctgaggacgaagatgaa
gactttgaagaaagaccagaaggtggcagaagacaatcacggagacagctgaagagtgac
cgggacaaacctctccctcctttgctggcaagagttggggggaatattgaggttctcggg
ttcaatgcccgccagcgcaaggccttcctgaacgccatcatgcggtggggcatgccgccc
caggacgccttcaactcccactggctggtgagggatctgcgagggaagagtgagaaggag
ttcagggcttatgtctccctgttcatgcgacatttgtgtgaacctggagcagatggtgct
gaaacctttgcagatggcgttccccgcgaggggctgtcacggcagcacgtgctgactcgg
atcggagttatgtcactagtaaggaagaaggtgcaggagtttgagcatgtcaatgggaag
tatagcaccccagatatgattctggagggcccggagagcaagaagtgcaatgagatggtt
tcttcagatcccaacacccctgtcccagccagcccggcgcacatacatgcaggacctctt
gcccttgcagaaaaaacagatccaccacttggattccaggaggaaaaggaccaagtggaa
cagaagtccgggagagcatctgacagccaggtgcctggaagctctgagaaagtggaaagt
gaggagtaccaagaaaactgtgaaagcaaggagaaactgaaggaagagaaacaagacgag
agtgaaaaagctgagccttctcctgagcccctggggaaagatgagggagttcaagaaaaa
gagaaggctttggaaaagccagagtcaaacagcagccctggtaaaggggaggacaaagaa
atcaagccagaggataccaaggtggaagagaaggagcaaagtgagactcagcaaaatggt
gacaaagaagaggaggatggaaagaaggatgacagaaatgtgaactttagattcatgttc
aacattgctgatggaggctttacagagctgcacacgctgtggcagaatgaggaaagagct
gccatctcctccagcaagatctatgacatctggcaccgcagacacgactactggctgctg
gcaggcattgtcacccacggctatgcccgctggcaggacatccagaacgacccacgttac
gtgatcctgaacgagcccttcaagtcggagatacacaaagggaactaccttgagatgaag
aacaagttcctcgcccggcgcttcaagctgctggagcaggccctggtgatagaggagcag
ctgcggcgggcggcgtacctcaacatgactcaagaccccaatcacccggccatggcattg
aacgcccgtctggctgaagtggagtgccttgctgaaagccaccagcatctctccaaagag
tcccttgctgggaacaagcctgccaatgccgtcctgcacaaggtgctgaaccagctcgag
gagctgctgagtgacatgaaggctgatgtgacacgcttgccctccatgctgtcccgcatc
cctcctgtggctgcacggctgcagatgtcggagcgcagcatcctcagccgcctcaccacg
cgtggcggggagcccccggtgcagcagggctcctttggttcctcccagatctacaacaac
agctttggaccgaatttccgaggtcctgggccaggtgggattgtcaactacagtcagatg
cctctgggaccctatgtgacagatatttag
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integrated database retrieval system
