Phasianus colchicus (Ring-necked pheasant): 116242583
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Entry
116242583 CDS
T07365
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcoc03037
]
116242583 (NPHP4)
Cilium and associated proteins [BR:
pcoc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116242583 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
TBX2-3_RD
Motif
Other DBs
NCBI-GeneID:
116242583
NCBI-ProteinID:
XP_031469261
Ensembl:
ENSPCLG00000021114
UniProt:
A0A669QW90
LinkDB
All DBs
Position
Unknown
AA seq
1383 aa
AA seq
DB search
MAEWERLFAQSRAVPPHTQRRHGAPERSVPFQCVLKCLEGSVVTQQPPAELQLRLSLFDA
AHRHFFGHTWHSSTRTPCSPPGQPPCVLFNEAVYFHTSLSHPSITAVLEVVAVAPTPEGL
SRDVSCGFGLIPLFDSRREPSDLAAKGRVLKLYHGTPRALLHPLLQDPLEKNKYMTIMEN
SHLQYTLKLHQPLEKVFHLLPENFLVSGLQKIPGLLPAHGDTGDIFLKPRLMGTAPCYLD
QLCVLLHPSLEEFEEELLEQLNSDRLLKQEAGSALCVQERRLRVGVHNGLRFVQAPQVAV
LQPAAEVARRQTTSSTDSAAKQALLLRSRLQLGEMVAHPAFGVCFQLEYVVCAAAKAAAG
SVLGPAAAMHTVRWALWSPFLGATSSPVLLPLRGGAHPSPSQTLVYRNPADSESSQQVKR
IASGSVQFHVSTDAEHRVTSTDISSKAGKEPEEPPTPSLSLRSPLRPAASTQGPGLSLSQ
LLASPQSRDERAVPRSRSAPVPRACSTQRDGRAERTAGITHLEADLRSGSPSVDASSSEH
LWALPFVPTQLPVTAVGLPAGSTALSRASLALLHTSGFPEILDGNKEPVEVTEPLNPAHF
SPRLEEVDALQSNEIILQFLAFSRAPQDALEGMWPRTVFLTFQFYRFPPVTTPRLQLLDA
DGERAVGSAVPAQVLLQLNKDGTPNTESAGLQLRYVVDPTFLRPGEQRVFVRYLAEHSLQ
MDIWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELDVVTTEYEQDAPPAAGRDVLCPLG
ARVAVRGRLHLCLANIGHRCEETPVSPRHPLLSHTHVVSSPGGGCLLSLHTSGDVRVSRA
RRLAEVDSELAAILCSHRLEQSPEPLHAPHEAAAIQQHKLQRLAALQQQEDADWRIPQRT
GCCEQCMQYLQIIDAYRERTKHRYISQMLSQAITITHTVYAMLGTAEFFEFALKNPYSVQ
HTVTVEVDHPELSVILDPREWRHFKELTQTATPLEEDMFHLQDDLRPQIYLRPKETVHIP
FRYQMFSAEPAATAVLGPVGLSKEDAGRMQEEPRAAQMRLIQVAFRVSGGKPIALLQVKV
EPRPHVVDQTFRFFHPELTFLKKAFRLPPWHTIPGAPVRMPGGDPEVYVRCSDPNVICET
KNMGPGEPQDVFLKVAGGPSPQIKTFFVAIYTDPWLATPLHIWQFYLHSLQRLDVSCTAG
QLSRLAVPLRGTRTLRRVKAFCSHPHELKVDPAGVFILPPNGVLDLFVGVRPRRAGSRFF
YLNLVDVECHQLLSSWLLCVTCRQPLISKAFEITIPAGSGKGSNKRITYTNPYPTRRLYF
LVTSRPDLLQFKEDSFQVAGGEVYTIGLRFAPSQSVGEEEILIHINDHQDKNEETFCVKV
IYY
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgggagcggctgtttgcacagagccgtgctgtcccacctcacacccagcgc
agacacggcgcgccggagcgctcggtgcctttccagtgtgtcctgaagtgcctcgagggt
tctgttgtcacgcagcagcccccagctgagctgcagctccgcctgtctctcttcgatgcc
gcccaccgccacttctttggccacacgtggcacagcagcacccggaccccctgcagcccc
ccagggcagcccccctgtgtgctcttcaatgaggccgtgtatttccacacctcgctcagc
caccccagcatcacagccgtgctggaggtggtggctgtggcccccaccccagaagggctc
tcacgggacgtgtcgtgtggcttcgggctcatcccactgtttgacagcaggcgggagccc
tcagacctggctgccaagggcagagtgctcaagctgtaccacgggacaccacgtgccttg
ctgcacccgcttctccaggaccctctagaaaagaataaatacatgactataatggagaac
agccacctgcagtacaccctaaagctccaccagcctctggagaaggtatttcacctcctt
cctgaaaacttcctggtgtctggcctgcagaagatccctggcctgctgcctgcacatggg
gacacaggtgacatcttcctgaagccgcggctcatggggacggccccctgctacctggac
cagctctgtgtgctcctgcacccttctctggaggagtttgaggaagagctgctggagcag
ctgaacagcgaccgcttgctgaagcaggaggctggcagtgcactgtgcgtgcaggagcgg
cggctgcgtgtcggtgtgcacaacgggctgcgcttcgtccaggctccacaggtggccgtg
ctgcagccagcagctgaggtggcccggagacaaaccaccagctccacggacagcgctgca
aagcaggcgctgctgctgcggagccgcctgcagctgggtgagatggtcgcccatccggcc
tttggggtctgcttccagctggagtacgtcgtctgtgctgcagccaaggctgcagccggc
agtgtgttgggcccagcagctgccatgcacacggtgcgctgggcgctttggagccccttc
ctgggtgccacctcctccccagtgctgctgcccctgcgcggcggtgcccatcccagcccc
agccagaccctggtgtacagaaaccctgcagacagcgagagctcccagcaggtgaagcgc
attgcgtcgggttccgtccaattccacgtttccactgatgcagaacatcgtgtgacttct
acagacatctcgagtaaagctgggaaggagccggaggagcctcctacgccatcactgagt
ctgcgctccccgctgcgcccggcagcctccacgcagggaccagggctgtctctctcacag
ctgctggcctcgccgcagagcagggatgagcgcgcagtgcctcggagccgcagtgcccca
gtgccccgggcctgcagcacgcagagggacggccgcgccgagcgcactgctggcatcacg
cacctggaggctgacctgaggtcgggctccccgagcgtggatgcctccagcagtgagcac
ctgtgggcgctgccctttgtgccgacgcagctgcccgtcacggctgtggggctgcctgct
gggagcactgcactcagccgtgcctcgctggcgctcctgcacacctctggcttcccagag
atcctcgatggcaacaaggagcccgtggaggtcacggagccgctgaaccccgcgcacttc
agtcctcggctggaggaagtggatgctctgcaaagcaatgaaataatcctgcagttcctt
gcgttcagtagggctcctcaggatgcactggaagggatgtggccgaggacagtgttcctc
accttccagttctaccgcttccccccggtcaccacgccgcggctgcagctgctcgatgcg
gatggcgagagggcagttgggtctgctgtgccagcacaagtgctgctccagctgaataag
gatgggaccccaaacactgaatccgcagggctgcagctgaggtacgtggtggatcccacc
ttcctgaggcctggggagcagcgtgtcttcgtgcgctacctggctgagcacagcctgcag
atggacatctgggatggggactcgctgctgctggtcggctctgctgcggttaaactgaag
cccctgctgcgccagggccggccggctgtcaggacgctgcatgagctggacgtggtcacc
actgagtacgagcaggatgcaccaccagcagcaggcagggatgtgctgtgtcctctgggt
gcccgtgtggccgtacgaggccgcctgcacctctgcttggccaacattggtcaccgctgt
gaggagactcctgtgagccccaggcacccactgctgtcccacacccacgttgtgtcctct
ccgggtggtggctgtttgctgtccctgcacaccagtggggatgtcagggtatctcgggca
cgcaggctggccgaggtggatagcgagttggcagccattctgtgcagccatcggctggag
cagagcccagaacccctgcatgccccacacgaggccgcggccatccagcagcacaagctg
cagcgcttggcagcattgcagcagcaggaggatgctgactggaggatcccacagcgcacg
ggctgctgtgagcagtgcatgcagtacctgcagatcatcgatgcctaccgagagcgcacc
aagcaccggtacatctcccagatgctcagccaggccatcaccatcacacacactgtgtat
gccatgctgggaacagctgagttctttgagttcgccctgaagaacccctacagtgtccag
cacacggtgacggttgaggttgaccaccccgagctcagtgtcatactggacccaagggag
tggcggcacttcaaggagttgacccagacagccaccccgctggaggaggacatgttccac
ctgcaggatgacctcaggcctcagatctacctgcggcccaaggaaactgtgcacataccc
ttccggtaccagatgttctctgcagagccggctgccacggcggtgctgggacccgtgggg
ctgagcaaagaagatgcagggaggatgcaggaggagccaagggctgcgcagatgaggctc
atccaggtggctttccgtgtgagtgggggcaaacccattgcgctgctgcaggtgaaggtt
gagccccggccccacgtggtggatcagaccttccgcttcttccaccccgagctgaccttc
ctgaagaaggccttccgcctgcccccatggcacacgatcccaggtgctccggtgaggatg
ccgggtggtgatccggaggtctatgtccgctgcagcgaccctaatgtcatctgtgagacc
aaaaacatgggtcctggggaaccacaggacgtcttcttaaaagtagctggaggaccaagc
ccgcagatcaaaacattctttgttgctatttatacggatccctggctggccacgccgctg
cacatctggcagttctacctgcactccctgcagcgtttggatgtcagctgcactgcaggg
cagctctcccgcctggccgtcccgctgcgcggcacccgcaccctgcgcagggtgaaggcg
ttctgctcccatccccacgagctgaaggtggacccagcaggtgtgttcatcctgcccccc
aatggggtcctggatctgtttgtgggtgtgaggccgcgccgggccggcagcagattcttc
tacctcaacctggtggacgtggagtgccaccagctgctgtcctcctggctgctctgcgtc
acctgccgacagccactcatttccaaggcctttgagatcaccatccccgcaggcagtggg
aagggctccaacaagcgcatcacctacaccaacccctaccccacacgcaggctgtacttt
ctggtcaccagccggcccgacctgctgcagttcaaggaggactccttccaggttgctggt
ggggaggtttacaccatcgggctgcgcttcgccccgagtcagagcgtgggtgaggaggag
atcctgatccacatcaacgaccatcaggacaagaacgaggagaccttctgtgtgaaggtc
atctactactga
DBGET
integrated database retrieval system
