Phasianus colchicus (Ring-necked pheasant): 116242782
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Entry
116242782 CDS
T07365
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04510
Focal adhesion
pcoc04512
ECM-receptor interaction
pcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116242782 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116242782 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116242782 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoc04147
]
116242782 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
pcoc00536
]
116242782 (COL4A2)
Exosome [BR:
pcoc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116242782 (COL4A2)
Glycosaminoglycan binding proteins [BR:
pcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116242782 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116242782
NCBI-ProteinID:
XP_031469622
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MDLSPLPGSRVFVCQDVGLLLVLLEVVLLAGRVDAGGKSYTGPCGGRDCSGGCQCFPEKG
ARGQPGHLGSQGLPGPPGLMGIPGLQGPKGHKGERGQPGISGPKGEMGLRGVTGFPGADG
IPGHPGQPGSRGKPGHDGCNGTIGDPGDPGTPGHSGFPGTIGVQGPKGQKGEPYVLPPDI
ASRHRGEPGDPGFVGFPGPPGTLGIQGPIGPRGTPGRPGPPGPPGPQGPQGNRGLGYYGE
KGEQGSPGPPGPPGLPTRELIGVPTDKHKGERGEPGQKGEAGFPGVLLFTPEKGEEGVIG
FPGQRGLPGNDGFPGLSGERGFPGFDGQPGQYGPRGGKGEQGEMGPPGTPAYVPYRIPRK
GVRGDPGFPGASGLQGEPGEQGDRGLPGIPGFSDGDADKPGLPGEIGPKGEKGEGGSPAY
QAGPPGFPGKHGEPGPRGPPGPPGTPGSLFGLKGQEGTPGRPGAQGFPGPRGQRGPKGEE
GDCSKCLLSDELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGIPGYAGAKGQSGQEG
FPGPKGEKGDSIYITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGLPGLPGDGIRGL
PGDPGYPGELGPKGFPGETGLPGGGFPGPKGYRGPPGDDGIKGNPGLPGLPGPPGEPGQI
DCGQVIEDFPRGDATDPIWSGGGCVRPPKGSQGKPGLPGATGTKGARGFPGDPGPVGFPG
LNGTRGDPGREGYPGPPGFIGPRGDSGPNGLPGLQGHPGLMGKSGAPGLDGQKGAPGDVL
GAAAGPQGDAGLPGLPGLKGAPGEQGIPGIRGADGNPGLPGPKGDPGLQGLPGLMGLPGI
PGTHGFPGPPGNPGPDGGPGSQGPLGPPGARGEDGEQGFPGLVGVKGQSGDKGETGFAGL
QGIPGVTGPPGISGMDGFPGDKGSRGSPGIDGFKGMPGLKGRPGIKGIKGEFGLFGTRGD
KGAQGARGFKGDRGEQGPPGEPPKPMPSMMMKVKGEKGDAGETGTKGFFGIKGSKGMPGF
PGKTGIPGSPGHPSYVPGVKGDIGAKGLTGLKGYPGPTGSPGIRGFPGSTGGRGDKGAPG
SSGHFGTPGSHGEIGEPGDTINLPGTPGLKGEVGVPGLTGLRGGPGQKGEGGDPGSPGIE
GIKGIQGVPGSLGQQGLPGLVGPPGQQGSPGTPGFQGEKGTPGWPGLPGQAGLPGLRGIS
GLHGLPGTKGLPGSPGPDGYGSAGMPGPVGDKGEAGEPSRVEGSQGPPGQKGDRGVPGIQ
GPFGIPGEDGFPGPPGISNISGYPGDIGSPGLDGVPGYPGLHGQPGIPAPPGSKGESGRA
GVSGQAGPKGTRGDPGLPGRPGIPGYPGPKGHQGEQGVIGFIGTVGFPGDLGPTGPKGDR
GLTGFQGPPGSPGLPPLPPRLVAEQGSPGPRGSTGPQGSPGDTGPQGPPGEPGFRGLPGE
PGLQGRGGIPAPPGSRGEQGAMGFQGPVGFEGQPGRPGSPGLPGMPGRSVSIGYLLVKHS
QSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICY
YANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQEASIPRCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcgccgcttcccggctcgcgtgtttttgtttgtcaggacgtggggcttctg
ctggtgctgctggaggtcgtgctgttggccggcagagtcgatgccggtggaaagagttac
acaggaccgtgtggaggaagagactgcagtggaggatgtcagtgtttccctgaaaaagga
gcccgtggccagccaggtcaccttggatcacaggggctccctggaccaccaggattgatg
gggatcccaggactgcagggtcctaaaggtcacaagggtgaaagaggacaaccaggaata
agtggacccaaaggagaaatggggctaagaggagtcactggtttcccaggggcagatggc
attcctggtcatccagggcagccaggatcaagggggaagccaggtcatgatggctgtaat
gggacaataggtgacccaggtgacccaggaacgccaggacattctggtttccctggtacc
attggagttcaaggaccaaagggccagaagggggagccctatgtgctaccgccggacatc
gccagccgacatcggggggagcctggagatccaggattcgttggttttccaggacctcca
ggtacactgggtattcaaggacctattggtccaagaggaacaccaggaagacctggacca
ccagggcccccaggaccacaaggaccacaaggcaacagaggtcttggctactatggagaa
aaaggtgaacagggctccccaggtcctccaggtccacctgggcttcccacaagagaactg
attggtgtccccactgacaaacacaaaggtgaaagaggagagcctggacaaaaaggggaa
gctggatttccaggcgtacttcttttcactcctgaaaaaggtgaagaaggggtaataggc
ttcccaggacaaaggggactgcctggtaacgatggttttccaggactcagtggagaaaga
ggttttccaggatttgatggtcaaccaggtcaatatggtcctagaggaggcaagggggag
cagggtgagatgggtcctccaggaacacctgcctatgttccttaccgcattccaagaaaa
ggtgtaagaggtgatccaggctttccaggtgcttctggactacagggagaaccaggagag
cagggtgaccgtgggctgcctggtattccaggattctctgatggagacgcagataagcca
ggcttacctggagagataggaccaaaaggtgaaaaaggtgaaggaggatctcctgcttat
caagcaggcccgcctgggtttccaggaaaacatggcgaaccaggaccccgtggtccacct
ggtccccctggaactccaggttctctctttggattaaaaggacaggaagggacaccaggt
agacctggtgcacaaggttttcctgggccaagaggtcaaagaggacctaaaggcgaagaa
ggtgactgcagtaaatgccttctgagtgatgaactcagaaggggctctactggcccccgt
ggtcctcctggttttccaggaactcctggccagcctgggagaaaaggagaacctggtgat
cagggtccacatggtattcctggctacgctggagcaaaaggacaatcaggccaagaagga
tttcccggaccaaaaggagaaaagggagattctatatacataactactaaaggtaccaaa
ggaatccgaggagatcctggacttcctggtatcagaggggaagatggtttcccaggcaga
gatggattagatggtttaccaggactgcctggccttccgggtgatggtatcagaggtctc
cccggggatcctggttatccaggagaattaggcccaaagggctttccaggagaaacaggc
ctgccaggtggaggatttcctggaccaaaaggataccgtggtcctccaggtgacgatgga
ataaaaggaaaccctgggcttccaggtctgcctggtccaccaggagagcctggccaaata
gactgtgggcaggtgattgaagattttcctagaggagatgcaactgatccaatatggtca
ggtggaggctgcgtgaggccaccaaagggatctcaaggcaagccagggctgccaggagcc
acaggtactaaaggtgcaagaggattcccaggtgatccaggcccagtgggattcccaggg
ctaaatggtacacgaggtgatccgggtcgggaaggatacccaggtcctccaggctttatt
gggccccgaggagacagtggcccaaatggcttacctggactacagggacatccaggtctt
atgggaaagtctggtgctccaggactggatggacagaagggtgctcctggtgatgttttg
ggagcagcagcaggtcctcaaggggatgctgggctgcctggcctccctggcttgaaaggt
gcaccaggagaacaaggaataccaggaattagaggagcggatggtaacccaggattgcca
ggccccaaaggtgatccagggttgcaaggtctccctggtttgatgggtttaccaggaata
ccaggaactcatggattcccagggccaccaggaaaccctggccctgatggtggacctggc
tctcaaggaccccttggtccaccaggtgcaaggggagaagatggcgagcaaggctttcct
ggtcttgtgggcgtgaaaggtcagtctggtgacaaaggtgaaacaggtttcgcaggatta
caaggtatccctggcgtgactggtccccctggcattagtggaatggatggctttccagga
gacaaaggctcaagaggttcacctggcattgatggtttcaaaggcatgccaggcctgaaa
ggaagaccaggaatcaaaggaatcaaaggagaatttggcttatttgggactcggggtgat
aaaggtgcacagggcgcacgaggctttaaaggtgaccgtggagaacaaggtcccccagga
gagcctccaaagccaatgcctagcatgatgatgaaagttaaaggtgaaaaaggagatgct
ggagaaactggcaccaagggattttttggcataaaaggtagcaagggaatgccaggcttc
cctggtaagacaggaattcctgggtccccagggcaccccagttatgtgcctggcgtgaag
ggggacattggtgcaaaagggctgacaggtctgaaagggtatcctggtccgactggctct
ccaggcatcagaggcttccctggcagcacaggaggcaggggagataagggtgccccagga
agttcgggtcattttggtactcctggctcccatggtgaaattggtgagccgggcgatact
ataaacttaccaggaacgccaggccttaaaggggaagttggtgtgccgggtcttacaggc
ttaagaggaggccctgggcaaaaaggcgaaggaggtgatcctggttcacctggcattgaa
ggcatcaagggcatacagggtgtacctggctccttgggacagcaaggtttgcctggactg
gttgggcctccagggcagcaaggaagccctggaacgcctggattccaaggagaaaaagga
actcccggctggcctggcttaccaggacaagcaggcttgcctggcttaagaggaatcagt
ggattgcacggtttaccaggcactaagggcttaccaggatcaccaggtccagatggctat
ggctctgcaggcatgccaggtcctgtgggtgacaaaggagaagcaggagaaccaagcaga
gtggaaggcagccaaggcccgccgggtcagaagggagacagaggtgttccaggaatccaa
ggaccttttggcattcctggggaggatggatttccagggcctcctgggatttccaatata
tcaggatatcctggtgatataggttccccaggtctagatggagtgccaggctatccagga
ctacatgggcagcctggaataccagctccaccaggaagcaagggagaaagtggacgagca
ggtgtgagcggacaagctggccccaaagggacaagaggtgatcctggattaccagggaga
cctgggattcctggttatcctggaccaaaaggtcatcagggtgaacaaggtgtcattggc
tttattggcacagtaggatttccaggtgatttgggacccactggacccaaaggggataga
ggacttactggctttcagggcccgccaggctctcctgggttgccacctcttcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaagtacaggacctcagggaagtcca
ggtgatacaggacctcaaggtccaccaggagaaccaggtttcagaggcttacctggagaa
ccaggactccagggcagaggtggcattccagcccctcctggatccagaggtgaacaagga
gcaatggggtttcaaggtccagtgggatttgaaggccagccaggtcgccctggtagcccc
gggctgccaggcatgccaggtcgcagtgttagcattggctacctgctggtgaagcacagc
cagtctgaccaagagccaatgtgcccaattggcatgaacaaactgtggagtggctacagc
ctcctgtacttcgagggacaagagaaagcacacaaccaggacctagggctggctggctcc
tgcttggctcgtttcagtacaatgccattcctctactgtaaccctggggatatttgttat
tatgcaaatcgaaatgacaaatcctactggctctcaactacagcacctcttccaatgatg
cctgtggcagaagaagaaattaggccatatatcagccgctgctctgtgtgtgaggcccca
gctgtggcaattgctgtccatagccaagaagcttctattcctcgctgccccgaaggctgg
cgcagtttgtggattggatattccttccttatgcacactgcggccggtgatgaaggtgga
ggacagtcgctggtgtctcctgggagctgcctggaagatttcagggctactcctttcatc
gagtgcaatggggcacgcggaacctgtcattactttgccaataagtacagcttctggctc
actacgattgaccagcccttccaaagcaagccttcggcagatacactcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaagaatttatag
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integrated database retrieval system
