Phasianus colchicus (Ring-necked pheasant): 116242805
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Entry
116242805 CDS
T07365
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116242805 (SOX1)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116242805 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116242805
NCBI-ProteinID:
XP_031469655
Ensembl:
ENSPCLG00000021057
UniProt:
A0A669QT42
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MYSMMMETDLHSPGGAPAPGGGLSGQSGAGGGGGGGGGGGKAGQDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLLKKDKYSLAGGLLGAGPAAGGPPAVGVGMGVGVSPGGVGQRLESPGGAAGGGYAH
MNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGGGGHPHHPHPHHPHHPHNPQPMHRY
DMGALQYSPISNSQGYVSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALGS
LVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPGGEGGDPAAAAAQSRLHSLPQHYQSAS
TGVNGTVPLTHI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcgcccggcggagccccggcgcccggc
ggcggcctctcggggcagagcggcgcgggcggcggcggcggcggcggcggcggcgggggc
aaagcggggcaggaccgcgtgaagcgccccatgaacgccttcatggtgtggtcgcggggg
cagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgg
ctgggcgccgagtggaaggtgatgtcggaggccgagaagcggcctttcatcgacgaggcg
aagcggctgcgggcgctgcacatgaaggagcacccggattataaataccggccccggcgg
aagaccaagacgctgctcaagaaggacaagtactcgctggccggagggctgctgggcgcc
ggcccggccgcgggcggccctcccgccgtcggcgtgggcatgggcgtcggcgtgagcccc
ggcggcgtcgggcagcggctagagagccccggcggggcggcgggcggcggctacgcgcac
atgaacgggtgggccaacggcgcctacccgggctcggtggcggcggcggcggcggcggcg
gcgatgatgcaggaagcgcagctcgcctacgggcagcacccgggcggcggggggcacccg
caccacccgcacccgcaccacccgcaccacccgcacaacccgcagcccatgcaccgctac
gacatgggcgcgctgcagtacagccccatctccaactcgcagggctatgtgagcgcctcg
ccctcgggctacggcgcgctgccctacggctcgcagccccaccagaactcggcggccgcg
gcggcggcggcggcggcggcggcggccgcctcgtcgggcgcgctgggcgcgctgggctcg
ctcgtcaagtcggagcccagcgtgagcccgcccgtcacctcgcactcgcgggccccgtgc
cccggggacctgcgggagatgatcagtatgtacttaccgggcggcgagggaggcgacccg
gcggccgccgccgcccagagccgcctgcactccctgccccagcactaccagagcgccagc
acgggggtcaacggcaccgtccccttgacgcacatctga
DBGET
integrated database retrieval system
