Phasianus colchicus (Ring-necked pheasant): 116243026
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Entry
116243026 CDS
T07365
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03420
Nucleotide excision repair
pcoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116243026 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
116243026 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoc04121
]
116243026 (DDB1)
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116243026 (DDB1)
Ubiquitin system [BR:
pcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
116243026 (DDB1)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
116243026 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
116243026 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
116243026
NCBI-ProteinID:
XP_031469982
Ensembl:
ENSPCLG00000022151
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDNIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRE
MDNMLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQINCTEMEHEVAC
LDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaattacgttgtgacggcgcagaagccgacggccgtgaatggctgtgtcacc
ggacacttcacctccgcagaggacctgaacctgctgattgccaagaacacacgcctggag
atctatgtggtgacagctgaggggcttcggcctgtcaaggaagtgggcatgtatggcaag
actgctgtcatggagctcttccgccccaaaggggagagcaaggatctgcttttcatcctg
acagccaagtacaacgcctgcatcctggagtacaagcagaatggtgacaatattgacatt
atcacccgtgcccatggaaatgtgcaggatcgcatcggtcggccctcagagactggtatc
atcggcatcattgacccagagtgccggatgattggcctgcggctctatgatggcctcttc
aaggtcatccccctggaccgtgagaacaaggagctgaaggcttttaatatccgcctggag
gagctccaagtcatcgacgtgaagttcctctatggctgtcaggccccaaccatctgcttt
gtctatcaggaccctcagggtcgccacgtcaaaacatacgaggtgtccctgcgtgagaag
gagtttaacaaaggcccttggaagcaggagaacgtcgaggctgaagcctccatggtcatt
gcagtgccagagccttttggaggcgcaatcatcattggacaggagtctattacctatcac
aatggagataaatacctggctatagctccacccatcatcaagcaaagcacaattgtgtgc
cacaaccgtgtggatcccaatgggtcccgttacttgctgggggacatggaaggacgtctc
ttcatgctgctcctggagaaggaggagcaaatggatggcacagtcaccctgaaggacttg
cgtgtggaactgcttggtgagacatccattgcagagtgcttgacctacctggacaatggt
gtggtgtttgttggctctcggcttggggattcccagcttgtgaagctcaacgtggacagc
aatgaacaaggctcctatgtagtggctatggagaccttcaccaacctcggtcctatcgtt
gatatgtgtgtggtagacctggagagacagggccaagggcagctggtcacgtgctcaggt
gcctttaaagagggttcactacggatcatccggaacggcattgggattcatgagcatgcc
agcattgacctgccaggaatcaaaggcttgtggcccctgaggtcagattctcatcgtgag
atggacaatatgctggtgctgtcctttgttggccagaccagggttcttatgttaaatgga
gaggaggtagaagaaacggagctcacagggtttgtggatgatcagcagaccttcttctgt
ggcaacgtggcacatcagcaattgatccagatcacctctgcctctgtgagactggtcagt
caggaacccaaagccctcgtgagcgagtggaaagagcccaacgggaagaacattagcgtg
gcttcctgtaacagcaaccaggtggtggtggctgtgggacgagctctctactacctggag
atccgaccccaggagctcaggcagatcaactgcaccgaaatggagcatgaagttgcctgc
ctggacatcactcctttgggagacactaatggcatgtcccctctgtgtgcgattggactc
tggactgatatctctgcccgcatcctaaagcttccttcctttgaactgctgcacaaagag
atgctaggaggagaaattatccctcgctccattctgatgacaaccttcgagagcagccat
taccttctgtgtgcactgggggacggtgctctcttctactttgggctcagccttgagaca
ggcttgctgagtgaccgtaagaaggtgacccttggcactcagcccacagtcctgaggact
ttccgctccctgtccaccaccaatgtgttcgcctgctctgaccgccccaccgtcatctac
agcagcaaccacaagctggtcttctccaatgtcaacctgaaggaggtgaactacatgtgt
cccctcaactcagatgggtatcctgacagcttagcattggctaataacagcacgctgaca
attggcaccattgatgagatccagaagctgcatatccgcacggttcccctctatgaatca
cccaggaagatctgctaccaagaggtatcacagtgttttggtgtgctctcaagtcgtatt
gaggtgcaagatgccagcgggggcaccactgcactcagacccagcgccagcacccaggcc
ctgtctagcagtgtgagtaccagcaagctgttctccagcagcacagcaccacacgagacg
tcctttggagaggaggtggaggtgcacaacctgctcatcatcgatcagcacacttttgaa
gtgcttcatgctcaccagtttctacaaaacgaatacgcccttagtctggtctcctgcaag
cttggcaaagacccaaacacttacttcatcgtgggtaccgccatggtgtatcctgaggag
gcagagccaaagcagggccgcatcgttgtcttccactactctgacggcaagctgcagagc
ctggctgagaaggaggtgaagggagctgtgtattccatggtggagttcaacgggaagctg
ttagccagcatcaacagcacggtgcgcctgtatgagtggacagctgagaaggagctgcgc
acggagtgcaaccattacaacaacatcatggctctctacctgaagaccaaaggagacttc
atccttgtgggagatctgatgcggtctgtcctgctccttgcctacaagcccatggaagga
aactttgaagagattgcccgggacttcaatccaaactggatgagtgctgtagagatcctg
gacgatgacaacttcttgggagcagagaacgctttcaacctgtttgtgtgccagaaggac
agtgctgccacgactgatgaggagcgccagcacttgcaggaggtggggctgtcccacttg
ggagagtttgtcaatgtcttctgtcacggctccctggtcatgcagaacctgggtgagacg
tccacaccaacacagggctccgttctctttggcacagtcaacggcatgatagggctggta
acttctctgtcagagagctggtacaacctcctgctggacatgcagaacaggctgaataaa
gtcatcaagagcgtgggcaagatcgagcactccttctggagatcgtttcacactgagcgc
aagacagagccagctacaggcttcattgatggtgacctgattgaaagcttcctggacatc
agcaggcccaagatgcaggaggtggtggcaaacctgcagattgatgatggcagtgggatg
aagagggaggccactgtggacgacctgatcaagatcgtggaggagctgacccgcatccac
tag
DBGET
integrated database retrieval system
