Phasianus colchicus (Ring-necked pheasant): 116243080
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Entry
116243080 CDS
T07365
Symbol
TNPO2
Name
(RefSeq) LOW QUALITY PROTEIN: transportin-2
KO
K18727
transportin-2
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116243080 (TNPO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116243080 (TNPO2)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116243080 (TNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
IBN_N
HEAT_2
Vac14_Fab1_bd
Cnd1
TOR1L1_N
HEAT_EF3_N
Arm
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
INTS7_N
UNC45-central
Dopey_N
SCD
TPR_TTI1_C
RTP1_C1
DUF2573
DUF3689
Motif
Other DBs
NCBI-GeneID:
116243080
NCBI-ProteinID:
XP_031470047
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MRNTTSDIGHTPSGIDTAPSGINPAARRRQPLALSRGHVVRRTVAGVGQCPRAAIRGQRP
VPPGRAQPSAPAPPPGLGSDPREQGLQQVLQLLKDSQSPNTATQRVVQDKLKQLNQFPDF
NNYLIFVLTRLKSEGEPTRSLSGLILKNNVKAHYQSFPPPVAEFIKQECLNNIGDASSLI
RATIGXXXXXXXHVGLGGSWRALTPPLCGXTQGAFGALQKICEDSSELLDSDALNRPLNV
MIPKFLQFFKHCSPKIRSHAIACVNQFIMDRAQALMENIDTFIEHLFALAVDEDPEVRKN
VCRALVMLLEVRIDRLIPHMHSIIQYMLQRTQDSDENVALEACEFWLTLAEQPICKEVLT
SHLVQLIPILVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIKPRFHKSRTVTLQHEEERP
PDPEDGEDEDDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHPEWVIKE
SGILVLGAIAEGCMQGMVPYLPELIPHLIRCLADKKALVRSIACWTLSRYAHWVVGQPPD
LYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQH
KNLLILYDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVAT
ALQSGFLPYCEPVYQRCVTLVQKTLAQAMMYNQHPDQYEAPDKDFMIVALDLLSGLAEGL
GCHVEQLVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFVHVKPCIAEFMPILGT
NLNPEFISVCNNATWAIGEICMQMGAEMQPYVQMVLNNLVEIINRPNTPKTLLENTAITI
GRLGFVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQVWGEG
ASIISPPPPQILHGFKDQVGEDNWHQFSEQFPPLLKDRLAAFYGV
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacaccacttccgatataggccacaccccttccggtatagacacagccccttcc
ggtataaaccccgccgccagacgcaggcagcctctcgcgctctcacgtggtcacgtggtg
cggcgtacggtggccggcgtgggtcagtgcccgcgtgccgcgatccgcgggcagcgcccg
gtgcccccaggccgagctcagccctccgccccggcgcccccccccgggctcgggagcgac
ccccgggagcagggattgcagcaggtgctgcagctgctgaaggactcgcagtcccccaac
acggccacgcagcgcgtcgtgcaggataaactgaagcagctcaaccaattccccgacttc
aacaactacctgatcttcgttctgacccgcctcaaatccgaaggtgaacccacgcggtcg
ctgagcggcctgatcctaaagaacaacgtcaaggctcactatcagagcttccccccccct
gtggccgagttcatcaagcaggaatgcctcaacaacatcggcgacgcctcctccctcatc
cgcgccaccatcggnnnnnnnnnnnnnnnnnnnntccatgtggggctgggggggtcctgg
agggcgctgaccccccccctctgtgggnncacgcagggggcgtttggggcactgcagaag
atctgtgaggattcctcggagctcctggacagcgatgcgctcaaccggccgctcaacgtc
atgatccccaaattcctgcagttcttcaagcactgcagccctaaaatcaggtcccatgcc
atcgcctgcgtcaatcagttcatcatggaccgcgctcaggcgctgatggagaacatcgac
accttcattgagcacctctttgctctggctgtggatgaggaccccgaagtgaggaagaac
gtctgccgagctctggtgatgctcctggaggtccgcatcgaccgcctcatcccccacatg
cacagcatcatccagtatatgctgcagcggacgcaggacagcgatgagaacgtggccttg
gaggcgtgcgagttctggctgacgctggcagagcagcccatctgcaaggaggtgctgacg
tcccatctggtgcagctcatccccatcctggtgaacggcatgaagtactccgagatcgac
atcatcctccttaagggtgacgtggaggaggacgaggccatccctgacagcgagcaggac
atcaaaccacgcttccacaaatcccgcacggtgactctgcagcacgaggaggagcggccg
cccgaccccgaggatggggaggacgaggacgacgacgacactttgtccgactggaacctc
aggaagtgctcggcggccgccctggatgttttggccaacgtctttcgggaagagctgctg
ccccacctgctgcccctgctgaaggagctgctgttccaccccgaatgggtcatcaaggag
tcgggcattttggtgctgggcgccattgctgaaggctgcatgcagggcatggtgccctac
ctaccggagctgatcccacacctgatccgctgcctggctgacaagaaggccttggttcgc
tccatcgcctgctggacgctgagccgctacgcgcactgggttgtggggcagccccccgac
ctctacctgaagcccctcatgactgagctgctcaaacgtatcctggacagcaacaaaagg
gtgcaggaggcggcctgcagcgccttcgccacgctggaggaagaggcgtgcaccgagctg
gtgccatatctcagcttcatcctggacacgttggtgtttgcctttgggaaataccagcac
aagaatctgctcatcctctacgatgccatcgggactttggccgactctgtggggcatcac
ctcaaccagccggagtacatccagaagctgatgcccccccttatccagaaatggaacgag
ctgaaagatgaggacaaggatctcttcccgctgctggagtgcctctcctccgtggccaca
gccctgcagagcggcttcctgccctactgtgagcccgtctaccagcgctgcgtcacgttg
gtgcagaagacattggctcaggccatgatgtacaaccagcaccctgatcagtacgaggca
cccgataaggacttcatgatcgtggcactggatctgctgagcgggctggcagaggggctg
ggctgccacgtggagcagttggtggcccgcagcaacatcatgacgctgctcttccagtgc
atgcaggacaccatgcctgaggtacggcagagctcctttgcccttcttggagatctcacc
aaagcctgcttcgtgcacgtcaaaccctgcatcgctgagttcatgcccatcctgggtacc
aacctcaatcccgagttcatctccgtctgcaacaacgctacgtgggccattggggagatc
tgcatgcagatgggggcggagatgcagccctacgtccagatggtgctgaacaatctggtg
gagatcatcaaccgccccaacacccccaaaacgctgctggagaacacagccatcaccatc
gggcgtttgggcttcgtctgcccgcaggaggtggccccgatgctgcagcagttcatccgc
ccctggtgcacctccctgcgcaacatccgtgacaacgaggagaaggactctgcgttccgt
gggatctgtgtgatgatcggggtgaaccccggcggtgtcgtgcaggtttggggggagggg
gcttccattatttcacctccccctcctcagatcctgcacggcttcaaggaccaggtgggt
gaggacaactggcaccaattctcagagcagttccctccgctgctcaaggatcgcctggcg
gcgttctatggggtgtaa
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