Phasianus colchicus (Ring-necked pheasant): 116243185
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Entry
116243185 CDS
T07365
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116243185 (VPS50)
Membrane trafficking [BR:
pcoc04131
]
Protein recycling
Others
EARP complex
116243185 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
116243185
NCBI-ProteinID:
XP_031470167
Ensembl:
ENSPCLG00000020009
UniProt:
A0A669QWK3
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVHDLSPIENLRFPTKEELRESWEEPTDPQAQQEIINSIEEV
YFSNDAFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQNGLQLAAVICADGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQEEAATVSSV
SDNSSVVGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSN
FSILQLHEFKFMVQSRSPSVSPSKQPASAISATVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSKKKSDY
SLNKGNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSTDATGTLAAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFECLQPHLDAVMPAAKKPFLQQFYSQTVSTANELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDSLLKEFEEFNRRLNEVSKRV
RIPLIVSNILWEHCMRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccggcagggtctgagaagtcctcaggagagtgtt
catgacctcagtcctattgaaaacctccggtttcctactaaggaggaactcagagaatca
tgggaagaaccaactgatcctcaagctcagcaagaaataattaatagcattgaagaagtt
tatttttccaatgatgcctttgatattgtgaagtatgaattggagaggcttcctcctgta
cttagtcttcaagaactggaagaatatagagacaaattaaagcaacagcaagctgctgta
tctaagaaagttgcggacttgattcttgaaaaacaacctgcatacgttcaggaactggaa
cgtgttacatcgttgcagaatggccttcagttagcagctgttatttgtgccgatggaaga
agacacctgaatattgcaaaagaaggcttcacacaaaccagtttgggacttcttgcaaac
caaaggaaaagacaattgcttattggactgctgaagtctctgaggacgataaaaacactg
caaagaactgatgtgcgtttaagtgaaatgctggaggaggaggactatccaggagctatt
caactgtgtttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttgaattcaaaactgcaagatactttggaacaaatagaggaacaattggatgtagca
ctctccaagatatgtaagaactttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttgggaaaacacagacagcaatggaccaattgcacatgcacttcactcaagct
attcacaacactgtgtttcaagtagtgcttggatatgtggagctttgtgcaggaaacact
gacaccaagtttcagaagttacaatacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgcaaagccctttgggaagtcatgctcagctattac
cgaacgatgcagtggcatgagaatcatgatcaagaagaggcagcaactgtgtcttctgtt
tcagacaacagcagtgtggttggaactgaggaaaacagttttgaccgtagctatgtaaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaacg
taccttctgggaacagatctgtctaacttcaaatatgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagcgttaactatttcaaaacataccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacctgggaactttgccccgttaaatcaaac
tttagcattttacagcttcacgaatttaaattcatggttcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcagcaacggtaactttatttgagcagtac
tgtaatggaggaaacccatttgaaattcaggctgacagcaaagatgatgagacagaggat
gtgttagcttccaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaagagtat
gatagtgacagcgatgttcctgaagagttgaaaagagactatgtagatgagcagacggga
gatgcccctatgaagagtgtttctcgagaaactctgaggagcaaaaagaaatcagattat
agtctcaataaagggaacgcacctatcctgacaaacactacactcaatgtagtaaggctt
gttgggaaatatatgcagatgatgaacattctcaagccaattgcatttgatgtcatccac
ttcatgtcccagctcttcgactactatctgtatgcagtctatacattttttggccgaaat
gacacgtttgaatcgacaggattgggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagcctcattgatctagaggtctccactgatgccacaggaactctcgca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagtcgttttg
acatctggcaattcactctatggtttggcagagagagtggtagccacggaatccttggta
tttctggctgagcagtttgagtgtcttcagcctcatcttgatgcagtgatgccagctgca
aagaagccttttcttcagcagttctattctcagactgtgtcaactgccaatgaactacgc
aaaccagtttattggattgttgctgctaaagccattgattatgaacagatgctgcttctc
atggctaatgtaaaatgggatgtgaaggaaatcatgtcacaacacaacatatatgtagac
tctcttttaaaggaatttgaagaatttaacagaaggttgaatgaggtatctaagagagtc
cgtattccactaatagtctcaaatatactttgggagcactgcatgcgcttggccaataga
actcttgtggaaggttatgctaatgtgaagaaatgcagcaatgaaggacgtgccttgatg
caactggacttccaacaattcttaatgaaactagaaaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcctactacttaacagaaaatgacatg
gagcgctggataaaagaacacagggaatattccactaagcacttgacaaatctggtgaat
gtttgtctggggtctcacatcaacaagaaggcaagacagaagctgctagctgctattgat
gacatagacaggcctaaaagataa
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