Phasianus colchicus (Ring-necked pheasant): 116243328
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Entry
116243328 CDS
T07365
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116243328 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116243328 (PEX1)
Membrane trafficking [BR:
pcoc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
116243328 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
RNA_helicase
DUF815
TIP49
AAA_28
AAA_5
AAA_22
ABC_tran
AAA_18
AAA_33
Sigma54_activat
AAA_29
IstB_IS21
NACHT
AAA_19
AAA_2
AAA_7
nSTAND_NTPase5
Sigma54_activ_2
APS_kinase
CoaE
Nup54_57_C
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
116243328
NCBI-ProteinID:
XP_031470347
Ensembl:
ENSPCLG00000020016
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MWGSGNPGGGGAGVAAATVVLSGTRDCFLHLPAVLASHLRLQQGQAVKVSCGDEPIYLSW
MEIRHRGHRSENIAEMNRHLAEKLGIADGEQIFLEPCLHVSSCQQVEVEPLSADDWEILE
LHAPSLEKHLLDQIRIVFPKAIFPVWVEHHTHIYIRIGTLMPAAPYGRLEPCTELLICPK
ARELEENIIDMPSTESDILLKSFVKNNMEQDETVKEPFASQPHLNPGVPEQSKADANVTF
GSNVLPNMWNFIGSIFSRTAEQKQKTLCDKDEMSTFKDKLLNLIHMDSIFRVCQSQPPSV
QNASALHAFLKYSAVHIFPWNLEFTDLDPNAVVSYGKINELLSPRQRHQEAKQNVPSEKQ
KHLTSTQDKNNSNSIQASGEGSVVQIVWNGFEDLKSVIEYGNGGEALHVGRVWIPDDLRK
KLRIEMHSTVRIKSLESIPKIPISLRLQPKQNLHKDTREDDVKCAFSAWLKDSATEDLPW
IMTSTNCIHLHIKEGVEEFVLSVMDHMHTEEDKSENTFILSPSLLQKTNIQVLLHPLTRK
ADDDSQLPTRDIDRNLPYKRLNHLGGVDKLGVSSFEHISHSLLGRPLSQKLAGIAVGLRS
GGVLLTGGKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLEAS
WRQPSIILMDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIKEVISLGSLIALIATS
QSEHALHPSLVSAQGTHIFQCFKRIQSPDQKQRCEVLCSVIKNKLNCDVKKLSDLDLQYV
AKETEGFVARDFTMLVDRAIHACISNQNAFQHGAELNLSTVDFQKALKDFTPLALRNVSL
HKPKDIGWDRIGGLKDVKQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLA
GVVARESGMNFISVKGPELLSKYIGASEQAVRDIFNRAQAAKPCIVFFDEFDSIAPRRGH
DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDLS
SRCEILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQLEAIHNLSSGLTQDFG
SSSDSDFSLSSMVFLNHSSGSDDSAIDGEAAPEQSLISLDMSELLPEDPRSNMYRLYFGS
SYESELGNGSPSELSSLCLSGPNSITHDFTNISQRDTASSQPSMLRTVSQEDSLENNQEQ
QIEHLRTEINAIKANYKSKNGEDSTLNQSVLAKNTLIITQSHLMTALEGIRPSISQDDWK
NFTELYNNFQNPKRKGQIGSAFRPGQRMTLA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcggcaaccccggcggagggggcgctggagtcgccgcggcgacggtcgtg
ctgagcgggacccgggactgcttcctgcacctgcccgccgtgctggcctcgcacctccgc
ctgcagcagggccaagctgtgaaagtatcctgtggtgatgagcccatatacttgagctgg
atggaaataaggcatcgaggtcaccggagtgaaaatattgcagagatgaacaggcattta
gcagagaaacttggcattgcagatggagaacagatattcctggaaccctgtttgcacgtc
tcctcctgtcagcaagtagaagtggaaccactctcagcagatgattgggaaatactggaa
ctgcacgctccctctcttgaaaagcatcttctggaccagatccgaatcgtattcccaaaa
gccatctttcctgtatgggttgaacaccacactcacatttacatcagaattggtacactt
atgccagcagccccctatgggagattagaaccatgcacagagcttctgatatgcccaaaa
gcgcgtgagcttgaggaaaacatcatagacatgccttctacagaaagtgacatcttactc
aagagttttgtcaaaaataacatggagcaagacgaaactgtaaaggagccttttgccagt
caacctcacttaaatccaggagtccctgaacagagtaaggctgatgcaaatgtgacattt
ggctcaaatgttctcccaaatatgtggaatttcatagggagcattttctctcgtacggct
gaacagaaacaaaagactttgtgtgataaagatgaaatgagcaccttcaaagacaagctg
ctgaacttaattcacatggattccatttttagagtatgtcagtcccagcctcccagcgta
cagaatgcatcagcccttcatgcatttctgaaatacagtgccgttcatatttttccatgg
aatttagaatttactgatttggatccaaatgctgtagtatcttatgggaaaataaatgag
ctgctttcccccagacagcggcatcaagaagcaaagcaaaatgtgccatctgaaaagcaa
aaacatttgactagtacgcaagacaaaaataattccaatagcattcaagcgtccggtgag
ggatctgttgttcagatcgtttggaatggatttgaagacctaaagagtgtcatagagtat
ggcaacggtggggaagccctacatgttggaagagtttggattccagatgacctgagaaaa
aagctacgaattgaaatgcattcaacagtccgaattaagtcacttgaatctattcctaaa
attcctatatctcttagactgcaacccaaacagaacttacataaagatacacgtgaagat
gatgttaaatgtgctttcagtgcttggctgaaggattctgctactgaggatcttccatgg
ataatgacaagcacaaactgcatacatctgcatattaaagaaggagtggaggagtttgtc
cttagtgtaatggatcacatgcacactgaagaagataagtctgagaatacttttatactg
agtcccagtttgctgcaaaagactaatatacaagttcttttacatcctctaactcgaaaa
gctgatgatgacagccaactgcctacgcgtgacatagacagaaaccttccttacaaaaga
ctaaaccatttagggggagtggacaaattaggagtgtcgtcttttgaacatataagccac
agtcttttgggtcgtcctttatctcaaaagctggctggtatcgctgtgggactgcgaagt
ggaggggtgcttctcacagggggaaagggaagtggaaaatcaacattagcaaaggccatc
tgcaaagaagcatttgatagattggatgctcatgtagaagtaattgattgcaaagcttta
agaggaaaaagattaggaaacataaggaaaaatgtggaagaagcttttttagaggcgtca
tggagacaaccatccattattttaatggatgaccttgatcacattgttggagtacctcct
acaccagagcatgagaacagccctgaaacagttcagagcagtagacttgcttatgttttg
aaagatctgataaaagaagttatttccctggggagtttgattgcattaattgctacaagt
cagtctgaacatgctctacatccttccctggtttcagctcaaggaactcatatatttcag
tgtttcaaacgtatccagtcaccagatcagaagcaaagatgtgaagtgctctgttctgta
ataaaaaacaaactgaactgtgatgtaaagaagctctccgatcttgatctccagtatgtt
gcaaaagaaacagaaggttttgttgctcgagattttactatgctggttgatcgtgccatt
catgcctgtatttccaaccagaatgcatttcaacatggtgcagaattgaatctgtcgact
gtggattttcagaaagctttaaaagatttcactccattagctctgagaaatgtcagcctg
cataaacctaaggacattggctgggataggataggtggcttaaaagatgtgaagcaaata
ctcatggataccatcatgttacctgcaaagtatccagaattatttgcgaacctgcctata
cgacagagatcaggagtcttgctctatggagcacctggaacaggaaaaacactgttagca
ggagtagttgctcgagagagtggaatgaatttcatcagtgtcaaaggaccagagctgctc
agcaaatatattggagcaagtgaacaagcggttcgagatatctttaacagagctcaagca
gccaaaccttgcattgttttctttgatgagtttgattccattgctcctcgccgaggtcat
gacaacactggagttacagaccgagtggttaatcaactattgactcagttggacggtgtg
gaaggtttacaaggtgtttatgtgctagctgctactagtcgcccagatttgattgatcct
gctttgttaagaccaggtcgactggataagtgcctgtactgtcctcctccagatctgagt
tcacgctgtgaaatcttaaaagctctcagtcattctctgtccttggcaaatgatgtggac
cttgagtatttggctgcaaaaacagagcatttcacaggggctgacctaaaagctttatta
tacaatgctcagttagaggcaatacataatttaagctcaggtttaacacaggattttggt
tctagttctgatagtgacttcagtctgtcttccatggtttttctaaaccatagcagtggc
tcagatgactcagcaatagatggagaagcagcacctgagcaatctcttatttctttggat
atgtctgagttgcttcctgaagatccaagatccaacatgtatcgtctttattttggaagc
tcttatgaatcagagctaggaaatggaagtccttcagaactgagctctttgtgtttgtct
ggaccaaactctataactcacgattttaccaacatatctcagagagacacagcatcatca
caaccttcaatgcttagaacagtctcccaagaagactcactggaaaataaccaggagcag
caaatagagcacctgaggacagaaatcaatgctatcaaagccaattacaaaagcaagaat
ggagaggacagcacccttaatcagtctgtgcttgccaagaacactttaattattacccag
tcccatctgatgactgctcttgagggtataagaccatccattagccaagatgactggaag
aattttactgaactgtacaataattttcagaatcccaagaggaaaggacaaattgggtca
gcattcagaccaggacaaagaatgactctagcatag
DBGET
integrated database retrieval system
