Phasianus colchicus (Ring-necked pheasant): 116243465
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Entry
116243465 CDS
T07365
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcoc03016
]
116243465 (TRMT13)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
116243465 (TRMT13)
Transfer RNA biogenesis [BR:
pcoc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116243465 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
DUF7077
Hom_end
Motif
Other DBs
NCBI-GeneID:
116243465
NCBI-ProteinID:
XP_031470552
Ensembl:
ENSPCLG00000022344
UniProt:
A0A669QXF0
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MAAREAAGGGSGSGAGPLPGRCAFFVRRKRRFCKMLPAPGRRFCGEHGQQEKENDRKRIP
CPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGVKEVAEIPANQVTLSSLSKEE
LENLIIKLKKASNGLELDLKEQVLSHQALEEALNDPKNGDSAFKHLKQQASILGNMEKLH
LLGPGRCFVEFGAGRGKLSHWVDVALQDIENIQFLLVERATTRFKVDGKHKKRDSIFERL
QVDIQHLCLNKVPILEKEKLPVVGIGKHLCGAATDLALRCLVESYATCCNEENEEPAPKR
SKNKAEGASNSLNDDDNERNKEDFKPVAGIVIALCCHHKCDWTHYVGREFFRSVGLGPVE
FHYFQRMSSWATCGMRRTVTKASTNEESEDHTSNTEEHDQTYSKTETGSDALQGLLTVEE
RKEIGSLCKLVIDHGRIRYLQRRGYKAALQYYTDSSVSLENVLLTAVPETTT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcgaggcggcgggcggcggctcgggctccggggcagggccgctgccgggg
cggtgcgccttcttcgtgcggaggaagaggcgcttctgcaagatgctcccggcgccgggg
agacgcttttgcggggagcacgggcagcaggagaaagaaaatgacaggaaaagaatcccg
tgccctcttgatccgaaacataccgtgtatgaagaccaactacaaaaacatttgaaaaaa
tgtaattccagagagaagccaaagccggtctattttgtccaagacattaatgcaggtgta
aaagaagtagcagaaataccagcaaatcaagtaactctctcttccctatccaaagaagag
cttgagaacttaattatcaagttgaaaaaagcaagtaatggtctggaactcgaccttaaa
gaacaagtactctctcaccaggctttagaggaagccttaaatgacccaaagaacggggac
tctgctttcaaacacttgaaacaacaggcttccattttaggtaacatggaaaaattacat
ttgcttggtccaggaagatgttttgttgaatttggagctgggcgaggaaagctatctcac
tgggttgatgttgccttacaagatattgaaaatattcagtttttgcttgtagaaagggca
actacaagattcaaggtggatggaaaacataaaaagagagattctatatttgaaaggctt
caagttgatattcagcatttatgtttaaataaggtacctattttagagaaggaaaaacta
ccagtggtaggaattgggaaacatttgtgtggtgctgccacagatcttgctttgagatgt
ttggtagaaagttatgcaacttgctgtaatgaagaaaatgaagagcctgcaccaaaacgt
agtaagaataaggcagaaggagcttctaacagtttgaatgatgatgacaatgaaaggaac
aaagaagactttaagcctgtagctggaattgttattgcactgtgttgccatcacaaatgt
gactggacacattatgtaggcagagagttctttagatcagtaggacttggaccagtagaa
tttcattattttcaaaggatgagtagctgggccacttgtggcatgagaagaactgtaacc
aaagcttctacaaatgaagaaagtgaagatcacactagcaacacagaagagcatgaccaa
acatacagtaaaacagagactggttctgacgctctgcaagggctccttactgttgaagag
agaaaggagataggttccctctgtaaacttgtgattgatcacggacggatcagatattta
caacgtcgaggatacaaggctgcactacagtactatacagattcctctgtgtccttggag
aatgtcctgttaacagctgtcccagagacaactacgtga
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