Phasianus colchicus (Ring-necked pheasant): 116243672
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Entry
116243672 CDS
T07365
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116243672 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoc03041
]
116243672 (DHX38)
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116243672 (DHX38)
Spliceosome [BR:
pcoc03041
]
Complex C
Other components
Step II factors
116243672 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
T2SSE
PhoH
SRP54
Microtub_bd
AAA_16
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
116243672
NCBI-ProteinID:
XP_031470886
Ensembl:
ENSPCLG00000021835
UniProt:
A0A669QVV0
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MGEASLHRLAGTGPEAEAGGLVPRARSAAAEQHVFKAPAPRASLLGLDVLAAQKRREREE
EGTGGKRSRVSSYRDWEEGRDEAGSPDEEEDEEEDRSRRSARKDRHYRSVHVETPSYTGG
VSEEFWERSRQRERERREHGVFASSKEKERKKEHSRDRDHDRKRDREDWDKSRHSSRSER
DGSLERNSRRSEPESPKHRPKDAATPSRSSWEEDDSSYSSSRRSQWESPSPTPSYRDSER
NHRASRDTDRRDRDRSVRSRYSDKTPLPTPSYKYNEWADDRKHLGSTPRLSRGRGRREDG
EEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSDEYVKKREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMG
IKKEEEKDDMVTEDGKVDYRTEQKFAEHMKEKSEARSEFAKKKSILEQRQYLPIFAVQQE
LLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKN
NNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSAR
CTKIYTPGRKEQGEPLTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggcgtcgctgcaccgactggccgggaccggccccgaggccgaggcgggcggg
ctggtcccgcgggcgcgcagcgctgccgccgagcagcacgtcttcaaggcgccggcgccg
cgggcctcgctgctgggcctggacgtgctggcggcccagaagcggcgcgaacgtgaggag
gaggggacgggcggaaaacggtcccgagtgtcctcctacagggactgggaggagggccgc
gacgaggcgggcagccccgacgaggaggaggacgaggaggaggatcggagccgtcgcagc
gcccgcaaggacaggcattatcgttccgtccatgtggaaacaccttcctacacaggtggt
gtcagtgaggagttttgggaacgcagccggcagcgggaaagagagcgtcgtgaacatggt
gtctttgcctcctcaaaggagaaggaacggaagaaggagcacagtagggatcgggaccac
gatcgtaaacgggaccgtgaggactgggacaaaagtcgtcacagcagcagatcagaaaga
gatggctcattggagcggaacagcaggaggagtgaaccagagagtcccaagcatcgtccc
aaagatgcagccacgccatctcgctccagctgggaggaggatgatagcagttacagcagt
tcccgccgctcacagtgggaatctccttcacccacaccttcctatcgagactcagagcgc
aaccaccgggcatcgcgggacacagatcggagagaccgagacaggtctgtaaggagcagg
tattcagataagacaccattgcccaccccatcctacaaatataatgagtgggctgatgac
cggaaacacctggggtccacaccacgactgtccagaggtagaggacggcgtgaggacgga
gaggagggcattgcctttgagacggaggaagaacgccagcagtgggaggatgaccaacgg
caagcggaccgggactggtatatgatggatgagggctatgatgagtttcacaaccccttg
gcctactcctctgatgagtatgtgaagaagcgggagcagcacttacacaagcagaagcag
aagcgtatctctgcacagcggcggcagatcaatgaggataacgagcgctgggagacaaat
cgcatgctgaccagtggtgtggttcatcggattgaagtggatgaagatttcgaagaggat
aactcagccaaagtgcatctgctggtgcataatctggtgcctcctttcctagatgggagg
atagtcttcacaaaacagccagagccagtcatccctgtaaaggatgccacttccgacttg
gccatcatagcccgaaagggcagccaattggtgcgcaagcacagggagcaaaaggagcgt
aaaagggctcagcataaacactgggagctggcaggcacaaaactgggagacattatgggg
atcaagaaggaggaggagaaggatgatatggtgacagaagatggcaaagtggattacagg
actgagcagaagtttgctgaacatatgaaagaaaaaagtgaagcgaggagtgagtttgcc
aagaagaagtcaattctggagcaaagacaatatctgcccatctttgctgtgcagcaggaa
ctgctttccatcctcagggacaacagcattgtgattgtggtaggggagacggggagtggt
aagacaactcagctgacgcagtacctccatgaggatggctacacagactatggcatgatt
ggctgcacgcagccccgcagagtggcagccatgtcagttgccaagcgggtcagtgaagag
atgggagtgcgcctgggagaggaggtgggttatgccatccgctttgaagactgcacgtca
gagaacacaataatcaaatacatgacagatgggatcctccttcgtgagtcgctacgagaa
gctgacttggacaactatagtgctatcatcatggatgaggcacatgagcgttcactcaat
actgatgtgctctttggcctgcttcgggaggtggtagcgcgacgctcggatctgaagctt
gttgtcacctctgccactatggatgctgataaatttgcctctttttttgggaatgttccc
attttccacattcctgggcgcacctttcctgttgatattcttttcagtaagacaccacaa
gaggattatgtggaggctgcagtgaaacaagctctgcaggtccatttgtctggtgcacct
ggagacatccttgtcttcatgcctggtcaggaggatattgaggtgacttcagaacaaatt
gtggagcaccttgaggagctggagaaagcacctgcacttgctgtactgcctatctattct
caactgccatcggacttacaagccaagatcttccagaaggctccagatggggtcaggaag
tgcattgttgccactaacattgcagagacctcactgacagtggatggtatcatgtttgtt
attgactctggatactgcaagctgaaggttttcaatccccgtataggcatggatgcactg
cagatctaccctatcagtcaagccaatgccaatcagagagctggtcgagctggccgaaca
ggcccaggtcactgcttcaggctctacacccagagcgcctacaagaacgagctgctgaca
accacagtgcctgagatccagcgcaccaaccttgccaatgtagtgcttctgctcaaatct
ctgggggtacaggacctgctgcagttccacttcatggatccgccccctgaggacaacatg
ctcaactccatgtaccagttgtggattttgggggccctggataacacaggtggtctgacc
tcaacaggacgtctgatggtggagttcccattggatcctgcgctctccaaaatgctcatt
gtttcatgtgatatgggttgcagctctgagatattgctcattgtttccatgttgtctgtg
cctgccatcttttatcggcctaagggccgagaggaagagagtgaccaagtgcgggagaaa
tttgctgtcccagagagtgatcacttaacttacctgaatgtttacctgcagtggaagaac
aacaactactctactctgtggtgcaaccagcacttcattcacgccaaggccatgcggaaa
gtgcgggaggtgcgtgcccagctcaaggacattatggtgcagcagcgcatgagccttgca
tcctgtggtactgactgggatgttgtcaggaagtgtatctgtgctgcgtatttccatcaa
gctgcaaagctgaaaggcattggggagtacgtcaatatccgtacaggtatgccttgccac
ctgcaccccaccagctccctctttggcatgggctacacgccggactacattgtatatcat
gagctggtcatgaccaccaaggaatacatgcagtgtgtcactgccgtggatggagagtgg
ctggcagagttgggccccatgttctacagtatcaaacatgctggcaaatcacgtcaggag
aaccgccgacgtgcaaaggaggaagtatccgccatggaagaagagatggctctggctgag
gagcagctgcgtgcccgccgggaggagcaggagcgccgtaacccgttaggcagtgcaaga
tgtactaaaatctatacgcctggacggaaggagcagggggagcccctgacgccacgacgc
accccagcccgcttcggcctctga
DBGET
integrated database retrieval system
