Phasianus colchicus (Ring-necked pheasant): 116243782
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Entry
116243782 CDS
T07365
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116243782 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116243782 (EDC4)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116243782 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
116243782 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
Beta-prop_TEP1_2nd
Uteroglobin
ApoLp-III
WDR55
INTS5_N
Motif
Other DBs
NCBI-GeneID:
116243782
NCBI-ProteinID:
XP_031471044
Ensembl:
ENSPCLG00000020411
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MASSNSIDIEDATQHLRDILKLDRPGGSVNENQRPSSSYNGDLNGLLVPDPLVAGDGPSL
AKPVHRSISLGAVQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMEKDKIQEEILVNIKRPDGTPLNTSRRIIWCPFI
PDDNEENSEEGSQTLALLHEDRAEVWDLDIIRSNNRSWPVEVPNIKEGFIVVKGHSTYLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQDEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSIEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMGASVPSHGSH
EEFAFPDHIADLGTEGLGSEKGSVHGSQPDLRRISDLPVPADFLSLSNDAKPKLMTPDAF
MTPSTSLQQITVSPGSSVSSLTAVTAMSSTSVTDASMSRPSEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNSSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFAAAPSALSAEVLEPSHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHILQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
TQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQEELMCVLRSQQR
ELSELRQNQMELLQRLTDHLDAIQSSLMGHMERVIDSQQEQEQRRLDRVLTEGQQRSGQL
QEHLSQQLSQTLSNAVSNRLERTVREEMKKTVPQCISKSVDPVAGQLSNTIATKLTAIEG
TLKENITKLVKSKNLTDSVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYVQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSTTEQLASTIAANIHAE
VQHQLHIIVGNLQESILTQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHL
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQQPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMSQVRQKLFQFLQVEPHN
TLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccaacagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggccgggaggttcagtgaatgagaaccagagaccgtcaagttcctataat
ggagacctgaatgggctgctggtgcctgatcccctcgtggctggagatggaccttcgctg
gcaaaaccagtgcaccgcagcatttctctgggagctgtgcaggagaagcaagtcatctgc
ctttccggtgacgacagctccacttgcatagttatatcagcaaaagatgtggaaatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgttgctagatatgactgggagcagaagtactattatggcaatctgatagctgtttca
aactcttacctggcttatgccattagagctgccagcaatggctctgctatggtgcgagtg
ttgagcgtcagcactgcggagcggaccttgctgaagggattcacgggtggtgtggcagac
ctggcttttgctcatctcaactccaaccagctggcatgcctggatgaggctggcaacctc
ttcgtctggcgcctggccatggagaaagacaaaatccaagaggagatcttggtgaacatc
aaacgacctgacggtacccctctgaacacctctcgaagaatcatctggtgtcctttcatc
ccagatgataatgaagagaatagtgaagagggaagtcaaacgttggcattgctgcacgag
gacagggcagaggtctgggatttggacattatccgctcaaacaacagatcctggccagtg
gaagtgcctaacatcaaagaaggcttcattgtagtgaaaggccacagcacgtacctgagt
gagggagcactttctccggatggaactgtattggccacagcaagtcatgatggttttgtc
aaattctggcagatctatattgaggggcaagatgagccaagatgtcttcatgagtggaaa
ccacatgatgggagacctctttcctgtctgctcttctgtgacaaccacaaaaaacaagat
ccagaggttcccttctggaggtttctcatcacaggagcagatcagaacagagaactgaag
atgtggtgcactgtgtcttggacctgcctgcagaccgtccgattttctcctgacatcttc
agctccatgagtattcttcctagcctgaaagtctgcctggatctctctgctgaatatctg
atactgagcgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagat
gagggcaaagcctatttcagttccatctcagagtttctcctaacccatccagtcctaagc
tttggcatccaggcagtgagccgctgccggttaaggcatactgaagtgcttccagcagaa
gaggaaaatgacaacttgagtatagaaggtgctcagggagcaggggctgttgagtcagca
gctggcgtgctgataaaactcttctgtgtgcacaccaaagcactacaagatgtgcagatt
agattccagcctctccatagtcctgatatgggtgcatctgtgccttcccatggctctcat
gaagaatttgcctttccagatcacatagctgatctaggcacagaagggttgggatctgaa
aaaggatctgtgcatggctctcaaccagacttgcgccgtatctctgatctgcctgtacca
gcagacttcctttcactctcaaatgatgccaagcctaagctgatgactccagatgcattc
atgacaccgagtacatctctccaacagatcactgtatctccgggcagcagtgtcagttcc
ctgactgcagtcacagccatgagcagcacttctgtcacagatgcttctatgtccaggcca
tcagaagacttgactgtgagccccaagatgcagctggacaccagccttacactgagcagc
agtagcagcagcctccaaaccagtcctaggagccattccgttcttatcccaggccttcct
gacaagctgacaccaaaggcacctgttccagtcacaccagggaactcctctctagcactg
gagctgcaggaagtggagcctttggtggtgcctcaggcttctcccacccgtgagcgttcg
ccagacgtcatttcctctgcttccacagccatgtcccaggatatccctgagattgcttct
gagaccttgcagcgtagctttgcagctgctccgtctgcactctctgcagaagtgctggag
cccagtcatcacgcagacagtatggcctctgcagcctcagccttgcatttgctgtctcca
aggaaccggcacaattcagagcacagccaccactctttggacatgcctccagtggaggtg
gacagactgaatgctccgtcgttactggagactgctttaactcaggaaaatgcgtcttcg
gacagtgttgtgagtcagccatggccagcagctcctgacataaccagagaaaccaggaac
agcatggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctatcat
cgacacagctaccacattctgcagcatgacagccaggatgctagtgcagaacaaagtgac
catgatgatgaagttgcaagtttggcttctacatcaggtggatttggtgccaaagcatct
acgcagaggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaag
ctaaagcggaagggcaagaaagatgacggggatgtgaaccagtcgccaagatcatctaac
aaccaggtgacaccagagttccaggaagagctgatgtgtgtgttgaggagccaacagcgt
gagctctctgagctgcgtcagaaccagatggagctgttgcagaggctcacagatcacctt
gatgccattcagagctcgctgatgggccacatggagagggtgatcgactcccagcaggag
caggagcagagaagactggatcgagtgctgacggaaggacagcagcgcagcgggcagctc
caggagcatctctctcagcagctctctcagaccctttccaatgctgtgagcaaccgtttg
gagaggactgttcgtgaggagatgaagaagacagtaccccagtgcatttccaagagtgtg
gacccagttgctggccagctaagtaacactattgccaccaagctcactgctattgagggg
acgctgaaggagaacattaccaagctagtgaaatcaaagaaccttacagacagtgttgtg
agagcaacagctgacaccctgcagggcccaatccagtcggcctacagggaagccttccag
agtgtcgtgttgccagcctttgagaagagctgccagtccatgttccagcaaatcaatgac
accttcaagcagggcacgcaggaatacgttcagcagctcgagactcacatgaagaacaag
aaggcacgagaacaggaggcccgggacccactgctgaatcagcttcgacagctcatcagc
accttccagagcaccaccgagcagctggcttccaccatcgcagccaatatccatgctgag
gtgcagcaccagctgcacattattgtgggcaacctgcaggagtctattttgacccaggtg
cagagagtcattaaaggagaagtgagcctggcaatgaaggagcagcaggcagctgtcacc
tcgagcattgttcaggcaatgcgttcggctgcagggactcccatcccctccactcacctg
gacttccagtctcagcaaactcacatccttcagctgctccagcagggccatctcaaccaa
gctttccagcaggctctaacagcagctgatctcaacctggtcctgtatgtttgtgagact
gtggacacacagcaagtgtttggccagcagccgtgcccgctgtcccagcctgtgctgctc
tcactcattcagcagctctcctcggatttgggtactcgtacggaactgaagctgaattac
ctggaggaggccgtgatgcacctggaccacagtgaccccatcactagggaccatatgggg
tcagtcatgagccaggtgcggcagaagctcttccagttcctccaggtggaaccccacaac
acactgagcaagcctgcacgccgcctgatgatcatgctgcagggcctggtcactcctggc
atgacctaa
DBGET
integrated database retrieval system
