Phasianus colchicus (Ring-necked pheasant): 116243905
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Entry
116243905 CDS
T07365
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116243905 (TDRD12)
Enzymes [BR:
pcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
116243905 (TDRD12)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116243905 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
116243905
NCBI-ProteinID:
XP_031471214
Ensembl:
ENSPCLG00000021147
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MEVFVLRIEDPGCFWVTMKGCGPHVVDEIEYKKLNAEMNEFYDKACEDEVKPITLEKDQL
CVVFSEELKCWCRAVVKSIMYCADHYQIECFLVDYAKYAFVKSKDVRVAVEGFMQIPFRA
KKCGLYCTKPVTLHVNLCEDTAKIVPAKRWDNAATRYFQRLLEATTQIKAKLCSVEDNTF
HVILYVTIEDEKVCINDDLVLKKFAHFEEAKENIQSPTKEQDNQTSLNVDSPPVEIVNPA
LAFRPVRLQEKVPMNLEAGYSVSGSSLEKTYRRSNMHLNENNEPKFQNLREEQSFVFLSN
KIEPTSILEKAPLHDNLKKELAQDKFLGPDFTESYSWPAIARGCDVVAISYQGNDPFLYI
PPVLAFLQVESCYKALPKRNGPLVLILCPGWRKAQLVFELLKKYSRCSRLIRPTLIILGK
KKEEAETVKIQGCEIIVTTPYSLLRLYEHHLFLFSGLCHLILDEIEVLFSEAAEQVFVIL
GYYKKNLVNEEWKYSPHQIIAVGTQWNKHIGRLIKEFMNDPYIVITALEEASIYGNVQQV
VQRCVSSERTAVLLKIMDFTPNNLQKVLVFTNSVDEVEIVHKALKSNSILAFKIHKEIEF
NFKDFLEHWTKSFSSGSRVVLVLTDDCMQFLEITDASCVIHFSFPSSPTIFGQRLYSMSD
NFHNTIKDSSDQDHQQARSVIMLTENSECHTVGILRYLERAEADIPPGLSGVLEAEEKKF
ARPLCTCLKMFGTCKNRTACPDRHEINLQIDMLQNMASKTIQTSGYVTVLPLHIVNATNY
FGRIVDKEKDQYTVLAEEINEYFKETSNRVAAQKVEKLALYGFCEETVFHRVQVVETSSK
EEENFNIKIKYVDEGRTSQVQSSQLLHLPARFQHLPPQAVEFVVCRVKPIDNDTEWNPRV
TRYIHQKIERKPHEAKVIFTLGNTVWIDPMVRVTRLSDLKMYVNEYSVRSEILSTGLGTD
NPEHILQLQKLCEHVKLSHTKNLEPLSIKEDAASPENVSELQDVSLKENPSENCNSSRVT
MGNHLHDGVVQTKEAEDSSLHQQKCFYPKIKWFENEETVTVKVQIVRIDDYKCEFSKEKV
IFSACSEGKLYSADMELYQCILTEKSACVIKDKEAIIVLRKEKKGAWCKLLKNKVKWKLT
LESLNVPNILSVLSSDISDCFFVNRILMCLLTLNTWKIMKTKALFQLVLKSCIALLQ
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctttgtattacggattgaagatccaggttgcttttgggttactatgaaagga
tgcgggcctcatgtagttgatgaaatagagtataaaaagctgaacgcagaaatgaatgag
ttctatgacaaagcttgtgaagatgaagtaaagccaataacattagaaaaagaccagctt
tgtgtggttttcagcgaggagctgaagtgctggtgtagagcagttgttaagtctatcatg
tactgtgcagaccattatcaaatagaatgttttctagtggattatgcaaaatacgctttt
gttaaatcaaaggatgttcgagttgcagtggaaggatttatgcaaattccatttagagca
aaaaaatgtggattgtattgcacaaagcctgtgacattgcatgtcaacctctgtgaagat
acagcaaaaatagtaccagccaaaagatgggataatgctgctacgcggtattttcaaaga
cttctggaagcaactacccaaatcaaagcgaagttatgttctgtggaagataatacattt
catgttattctttatgtgacaatagaagatgaaaaggtatgcattaatgatgatcttgtc
ttaaagaagtttgctcattttgaggaagctaaagagaatattcaaagtccaacaaaagag
caagataaccagacatcattaaatgttgattctcctccagtagaaattgttaatccagca
cttgctttcaggccagtgcggttgcaagagaaggtaccaatgaatcttgaagcaggttat
tctgtttctggttcctctcttgaaaagacatacagaaggtcaaacatgcatctcaatgaa
aataatgaacctaaatttcaaaatcttagagaagaacaaagctttgtctttcttagcaac
aaaattgaaccaacttcaattttggaaaaagcgccacttcatgataatctgaaaaaggaa
cttgctcaggataagtttttaggccctgacttcacagaatcttactcttggccagcaata
gctcgaggatgtgatgtagttgccatctcctatcaaggaaatgaccctttcttatatatt
cctccagttcttgctttcttgcaagtggaaagctgctacaaagccttgccaaaaagaaat
ggaccgctggtgcttattttatgtcctggttggaggaaggcacagcttgtttttgagtta
ctgaaaaaatacagcagatgctctagactgattcgtccaacattgattatacttgggaag
aaaaaagaagaagctgaaacagtgaaaatccaaggatgtgaaataattgtgactacaccg
tatagcctcctaagattgtatgaacatcaccttttcttgttttcgggactctgccatctt
attttggatgaaattgaggtactattctctgaagctgctgaacaggtttttgttatacta
ggttactacaagaaaaaccttgttaatgaggaatggaaatactcaccacatcaaattatt
gctgttggaactcagtggaataagcatataggacgtttaataaaggagttcatgaatgat
ccttacattgtgataacagctttggaagaagcttccatttatggaaatgtgcaacaggtt
gtgcagcgttgtgtgagcagtgagagaactgctgtgttgctcaaaataatggattttacc
cctaataatcttcagaaggtgctggttttcactaattccgtagatgaagtagaaatagta
cataaggcactgaagagcaactcaatattagccttcaaaatacataaggaaatagagttt
aatttcaaggatttcttagagcattggacaaaaagcttcagcagtggcagtcgtgttgtg
ttagttctaacagatgactgcatgcagttcttggagattacagatgcatcttgtgtgata
catttcagttttccttcttctccaacaatcttcggtcagcgtctatacagcatgtctgac
aacttccataatacgataaaggattcatctgatcaggaccatcaacaggcaaggtcagtc
ataatgctaacagaaaacagtgagtgccatactgttggtatcctgcgctatttggagcgt
gctgaagctgacattccaccaggattgtctggggtgctagaagctgaagaaaagaagttt
gcaaggccattgtgcacctgtcttaaaatgtttgggacttgcaagaatagaacagcgtgt
ccagatcgtcatgaaattaatttacaaatagacatgctccagaatatggcatctaaaact
atacaaacatctggatatgtgacagtactgcctctccacattgtaaatgcaacaaattac
tttggtcgtatagtagataaagaaaaggaccaatatacggttcttgctgaagaaatcaat
gagtattttaaggagactagtaatagagttgctgctcaaaaggtagagaagctagctttg
tatggattctgtgaggaaacagtctttcacagggtccaggtggtagagacttcttcaaaa
gaagaagaaaattttaacatcaaaattaaatatgtagatgaaggcagaactagtcaagtt
cagtcctctcagcttcttcacttacctgcaagatttcagcatctgccacctcaggctgtg
gaatttgtagtttgtagagttaaacctattgataatgacactgagtggaacccaagggtg
actcgttatattcatcagaaaattgaaaggaaaccacatgaagcgaaggtaatatttact
ttaggaaatacagtttggattgacccaatggtccgggttaccaggctttcagatttgaag
atgtatgtcaatgaatacagcgtgcgatctgagattttgtctacgggtctgggaactgat
aatccagaacatatattgcaacttcagaagttgtgtgagcatgtgaagttaagtcacaca
aagaatttggagcctttaagcataaaggaggatgcagctagtcctgaaaatgtgtctgaa
ctgcaggatgtgtccttaaaggaaaatccttcagaaaactgtaattcttctagagtgact
atggggaatcatctgcatgatggtgttgttcaaactaaggaagcagaagactcttcactg
catcagcagaaatgtttctatccaaaaataaaatggtttgaaaatgaagagactgttaca
gtgaaggttcaaatagtgaggatagatgactataaatgtgaattctctaaggaaaaggta
attttcagtgcctgctcagaaggcaaactttactcagctgatatggagctgtatcagtgt
atacttacagaaaagtctgcatgtgtgattaaggataaagaggctattattgtcctcaga
aaagagaaaaaaggagcatggtgcaagttactaaagaacaaggtgaagtggaaattaact
ttagaatcactgaatgttcccaacatactatctgttttaagttcagatatttcagactgt
ttttttgttaacagaatcctcatgtgtcttttgactttgaatacttggaagattatgaag
acaaaagcccttttccagttggtactaaaaagttgcattgcactgctgcagtga
DBGET
integrated database retrieval system
