Phasianus colchicus (Ring-necked pheasant): 116243970
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Entry
116243970 CDS
T07365
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116243970 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116243970 (SF3B3)
03041 Spliceosome [BR:
pcoc03041
]
116243970 (SF3B3)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116243970 (SF3B3)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116243970 (SF3B3)
Spliceosome [BR:
pcoc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
116243970 (SF3B3)
Complex B
116243970 (SF3B3)
Complex C
U2 SnRNP specific factors
116243970 (SF3B3)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
116243970 (SF3B3)
TFTC complex
116243970 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
116243970
NCBI-ProteinID:
XP_031471299
Ensembl:
ENSPCLG00000022409
UniProt:
A0A669R068
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNGGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacctcaccttacagcgtgccacgggcatcagctatgccatccatggc
aacttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcttggagctg
ctccgtccagaccccaacacagggaaggttcacaccttgctgacagtggaagtgtttggg
gtcatccgctccctcatggccttccggctgacaggagggaccaaagactacattgttgtg
ggcagcgactcaggacgcattgttatcctggagtaccagccatccaaaaacgtgtttgag
aagattcatcaggaaacctttggcaagagtggatgtcgcaggattgttccaggccaatac
ttggccgtggacccgaagggccgtgctgtcatgatcagtgctattgaaaagcagaagctg
gtgtatatcttaaacagagatgctgcagctcggctcaccatttcctccccactggaagcc
cacaaggccaataccttggtctaccacgtggtgggagtcgacgtgggatttgaaaaccca
atgtttgcttgtctggaaatggattatgaggaagcagacaacgatccaacaggagaagca
gcagccaacacgcaacagaccttgacgttttatgaactggacttgggtttgaaccacgta
gttagaaaatacagtgagcctctggaagagcatggcaacttccttataacagttcctggt
ggttctgatggacctagtggggtgctgatctgttcagaaaactatatcacttataaaaac
ttcggtgaccagccagatatcagatgcccaattcccaggagacggaatgacttggatgac
ccagagagaggtatgatttttgtctgctctgctacacacaagaccaagtccatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaatcaccctggagactgacgaggac
atggtaactgagattcgactgaagtactttgacactgttcccgtagctgctgccatgtgt
gtgctgaagacaggatttctctttgtggcatctgaatttggaaatcattatctgtaccag
atagcccatctgggagatgatgatgaggaaccagagttctcttctgccatgccccttgag
gaaggggatacattcttttttcagccacgacctctcaaaaacctggtgctggtggatgaa
ttggacagtttgtctcctattctgtgttgtcagatagcagatcttgccaatgaggacaca
ccccagctgtatgtggcctgcggtcgggggccacggtcatctctgagagttctaagacat
ggacttgaggtatctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg
actgtgaggagacacgttgaagatgagtttgatgcctatatcattgtgtccttcgtaaac
gccacactggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacgcccaccttgtcctgctctcttctgggagatgatgccttggtacaggtgtac
ccagatggcatccggcacatccgagcagacaagagggtaaacgaatggaagacaccaggg
aagaaaacaattgtgaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagagctggtatattttgagatggacccgtcaggacagctgaatgagtacactgaaaga
aaggagatgtcggctgatgtagtttgcatgagtttggccaatgttccacctggagagcag
cgctcccggtttcttgctgtcgggctggtggacaacactgtcaggattatttccctcgac
ccttcggactgcttgcagccactgagtatgcaggcccttcctgcacagcctgagtcgctg
tgtatcgtggagatgggtggcaccgagaagcaggatgagctgggggagagaggctccatt
ggctttctctacctgaacattggactgcagaatggtgtgctgctgcgaactgtcctggat
ccggttacgggtgatctttctgataccaggaccaggtacctgggctcaaggcctgtgaag
ctcttccgagtccgaatgcaaggccaagaagcggtgctggccatgtcaagtcgttcctgg
ctcagttactcctatcagtcccgtttccacctgactcccctgtcttatgagactctggag
tttgcgtccggttttgcatctgagcagtgcccagagggtattgttgccatctccacaaac
acactgaggattttggcactggagaaactgggggcagtcttcaaccaggttgccttccca
ttgcagtacacgcctcgaaaatttgttattcaccctgagagcaacaacctgattatcatt
gagacggaccacaatgcttacactgaggccaccaaggcacagaggaagcaacaaatggct
gaggaaatggtggaggctgcaggtgaagatgagagagagttggctgccgagatggctgca
gcttttctgaacgagaatcttcctgaatccatctttggtgctccaaaggcagggaatggg
cagtgggcttctgttatcagggtgatgaaccccatccagggaaatacattagatctggtc
cagctagagcagaacgaagctgccttcagcgtggctgtgtgccgcttctccaacactggt
gaggagtggtatgtgctggtgggagttgccaaagacttgattctgaacccgcgctctgtt
gctgggggctttgtctacacctacaagctggtgaatggtggtgaaaagctggagtttctg
cacaagacccccgtggaggaggttcctgcagccattgctcctttccaaggtagagtccta
attggagttggaaagctcctgcgtgtgtatgacctgggcaagaagaagctgcttcggaag
tgtgagaacaagcatattgccaactacatctgtgggattcaaactattgggcacagagtg
atagtttcagatgttcaggagagtttcatctgggtgcgctacaaaaggaacgagaaccag
ctcatcatctttgctgatgatacttatccccgctgggtcaccacagcaactctcttggat
tatgacaccgtggctggagcagacaagtttggcaacatctgcgtggtgaggttgcctccc
aacaccaatgatgaggtagatgaggatcccactggcaacaaagctctctgggacaggggg
ctgcttaatggagcatcgcagaaggctgaagtgattatgaattaccacgtgggagagaca
gtgctttcattacagaagaccacgctgatcccaggaggctctgaatctcttgtctatact
accttatcagggggaataggaatcttagttccttttacttctcatgaggatcacgacttc
ttccagcacgtggaaatgcacttaagatctgaacatcctcctctctgtgggcgagaccat
ctcagtttccgctcctactacttcccagtgaagaatgtgatcgatggggacctgtgtgag
cagttcaactccatggagcccaacaaacagaagaatgtggccgaagagctggaccggacc
ccacccgaggtgtccaagaagctggaagacatccgcacacgctatgctttctga
DBGET
integrated database retrieval system
