Phasianus colchicus (Ring-necked pheasant): 116244552
Help
Entry
116244552 CDS
T07365
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116244552 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116244552 (CSTF1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
116244552 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
CSTF1_dimer
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
VPS8_N
PROPPIN
Beta-prop_WDR11_1st
Beta-prop_HPS5
Frtz
Motif
Other DBs
NCBI-GeneID:
116244552
NCBI-ProteinID:
XP_031472177
Ensembl:
ENSPCLG00000000249
UniProt:
A0A669P0G2
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSGRRVAAACDRRQLPRGMGSMAAPLLDPRPLRLPFLEADSRLQSICGRSMQQPSRRSIL
RSRPPPPPPPLPPPPIDALRAPVAILGGERGRQKEGSAPPRHSLLTMYRTKVSLKDRQQL
YKLIISQLLYDGYINIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDSAVQYAIGRSDT
VAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSADASIKI
LDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILASGSRD
YTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDINTFQCFVS
CNPQDQHIDAICSVNYNASANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAIF
SKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQVHRTQAVFNHTEDYVLLPDER
TISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMTCSDDYRARFWYRRSTTD
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcgtcgtgtggctgccgcgtgtgaccgacgccagctgccgcggggcatgggg
agcatggcagccccgctgctcgacccgcgtccgcttcggctgccgtttctggaggctgac
agtcgcctccaatcgatttgcgggcgctcgatgcagcagccttcgcggaggagcattctt
cggtctcggccgccgccgccgcctcctcccttaccgccgccgccaatcgatgcgctcagg
gctccggtcgccattttagggggagagcgagggaggcagaaggaaggctcggcccctcca
aggcattccttgctcacaatgtataggacgaaagtcagcttgaaagaccgtcagcagctt
tataaactaatcattagtcagctactgtatgatgggtacataaatattgccaatggctta
ataaatgagataaaaccacaatcagtgtgtgcgccatctgaacaactgctgcatcttatt
aaattagggatggagaatgatgacagtgctgttcaatacgcaattggacggtcagataca
gtagctccaggcacaggaatcgacttggaatttgatgcagatgtacagaccatgtctcct
gaggcctctgagtatgagacttgttacgtcacgtctcataagggaccgtgtcgtgtagca
acatacagcagagatggacagctaatagctacaggatctgctgatgcctcaataaaaatt
cttgatacagagagaatgctggccaaaagtgctatgcctattgaggtcatgatgaatgag
acagcacagcaaaacatggaaaatcaccctgttattcggactctgtacgatcatgtggat
gaggttacatgtttagcttttcatcctacagaacagatcctagcatctggttcaagggac
tacacacttaaattgtttgactattcaaaaccttctgccaaaagagccttcaaatacata
caggaggcagagatgttgcgctcaatctctttccatccatctggagatttcatacttgtg
ggtacccagcaccctactttgcgactctatgatatcaatactttccaatgttttgtgtct
tgcaatcctcaagaccagcacatcgatgccatatgttcagtgaattacaacgcaagtgca
aacatgtatgtgacaggaagcaaggatggatgcatcaaactatgggatggtgtttcaaat
cgctgcatcactacttttgagaaggcacatgatggagctgaagtctgttctgctattttt
tctaaaaattccaaatatatcttgtcaagtggaaaagactctgtagctaaactgtgggag
atatctactggtcggacgctagtcaagtacacaggagctggtttgagtggacgtcaagta
cacaggacacaagcagtcttcaatcacacagaagactacgtgctgctgccagatgaaagg
accataagtctctgctgctgggattcaagaactgctgagcgaagaaatctcctttctctt
gggcacaacagcattgtccgctgtattgtccattctcctaccaaccctggcttcatgacc
tgcagtgacgactacagggctagattttggtacagaaggtcaacaacagactaa
DBGET
integrated database retrieval system
