Phasianus colchicus (Ring-necked pheasant): 116244616
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Entry
116244616 CDS
T07365
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116244616 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcoc03310
]
116244616 (RORA)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116244616 (RORA)
Nuclear receptors [BR:
pcoc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116244616 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HisG
Motif
Other DBs
NCBI-GeneID:
116244616
NCBI-ProteinID:
XP_031472284
Ensembl:
ENSPCLG00000002155
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MMCFVLAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLIAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgttttgtgctcgccgcgatgaaagctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggc
tttttcagaaggagtcagcaaagcaatgctacatactcctgtcctcgtcagaagaactgt
ttgattgaccgaaccagtagaaaccgctgccaacactgtcgattacagaaatgccttgct
gtggggatgtctcgagatgctgtgaagtttggtcgaatgtcaaaaaagcagagggacagc
ctgtatgcagaggtgcagaaacatcgaatgcagcagcagcagcgagatcatcagcagcag
ccaggagaggcagaaccactaacaccaacgtacaatatcaccaccaatgggttaacagag
ctacacgacgacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagac
tctgcagttagcagcttctacttagacatacaaccttctccagatcagtcgggtcttgat
attaatggaatcaaaccagaaccaatatgtgactacacaccagcatcgggcttcttccct
tattgttcttttacaaatggggagacctctccaactgtgtccatggcagaattagaacat
cttgcacagaatatttccaagtctcacatggaaacttgccagtacttgagagaggagcta
cagcagataacatggcagacttttctgcaggaagaaattgagaactatcagaacaagcaa
agggaggtaatgtggcaattatgcgcagtcaaaataacagaagctatacagtatgtagtg
gaatttgccaaacgcattgatggctttatggaactgtgtcaaaatgatcaaattgtgctt
ttaaaagcagggtctttagaggttgtgttcatcagaatgtgccgtgcctttgactcccag
aacaacacagtctactttgatggcaagtatgctagcccagaggttttcaagtccttaggt
tgtgaagacttcattagttttgtgtttgaatttggaaaaagtttatgttctatgcacctg
acagaagatgagatagctttgttttctgcatttgttttaatgtcagcagatcgttcatgg
cttcaggagaaggtaaaaattgaaaaactccaacagaagatccagctagcacttcagcat
gtcctacagaagaaccaccgagaagatggaattctaacaaagttaatatgcaaagtgtct
actttaagagcactgtgtggacgacatacagaaaagcttatcgcatttaaagcaatatac
ccagacattgtacgacttcattttcctccactttacaaggagctgttcacttcagaattt
gagccagcaatgcaaattgatgggtaa
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