Pseudomonas coronafaciens pv. oryzae: POR16_01025
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Entry
POR16_01025 CDS
T08147
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03030
DNA replication
pcof03410
Base excision repair
pcof03420
Nucleotide excision repair
pcof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
POR16_01025 (polA)
03410 Base excision repair
POR16_01025 (polA)
03420 Nucleotide excision repair
POR16_01025 (polA)
03440 Homologous recombination
POR16_01025 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcof03032
]
POR16_01025 (polA)
03400 DNA repair and recombination proteins [BR:
pcof03400
]
POR16_01025 (polA)
Enzymes [BR:
pcof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
POR16_01025 (polA)
DNA replication proteins [BR:
pcof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
POR16_01025 (polA)
DNA repair and recombination proteins [BR:
pcof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
POR16_01025 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
POR16_01025 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
QGL55012
LinkDB
All DBs
Position
complement(209122..211887)
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPESPLAVVFD
AKGGTFRDALYTDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGVGGGIKELYDNLEKVATLPIRGAKTLAAKLEEHREM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDLQRDAMRAGQEL
VVEEPTVAAKEAAYEVILEQDRFDAWLKKLQAAPLFAFVTQSNGNDAQRAQLVGLSFAIQ
THEAAYIPLTHSYMGVPQQLDRDTVLKALKPLLEDPDKTKVGQHAKFAINLLANCAIGGD
QAHGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPVNFQDIAGKGAKQLTFDQ
IAIEQAGNYAAEEADLTLRLHEVFETRLAAIPTLQPVLSDIEMPLVPVLARIERQGALVD
ANLLGIQSVELGDKMTALECEAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQPS
TAEAVLSELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRVHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLARDEGLLHAF
RNDLDVHRATAAEVFGVELEGVTNDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLDYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLEESGLDARVILQVHDELVLEVREDLVEQISEQIRPHMSGA
AELAVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccgctcgtcctggtggacggttcgtcctacctctaccgcgccttccac
gcactgcctcccctgaccacgtccaaagggttgccgaccggcgccgtcaagggcgtgctg
aacatgctcaagagcctgcgccgccagtaccccgaaagcccgctggccgtggtcttcgat
gccaagggcgggactttccgggacgcgctgtacaccgactacaaagccaaccgtcccagc
atgccggacgacctgcgtgtgcaggtcgatctgctgcatgcctgcgtcaaaggcatgggc
tatccctttctgtgcgtcgaaggcgtcgaagctgatgacgtgatcggcaccctggcgcgc
agcagcgcggcggcggatcgcccggtggtcatttccaccggcgacaaggacatggcgcag
ctggtcgacgggcatatcacgctggtcaataccatgaccggcagcgtgctggacgttgca
ggcgtgaaggagaagttcggcgtcggcccggaacacatcatcgattacctggcgctgatg
ggcgacaaggtcgataacatccccggcgtgcccggggtcggtgaaaaaaccgcagtcggc
ctgttggtcggcgtcggtggcgggatcaaggagctttacgacaacctcgagaaggtcgcg
accctgccgatcaggggcgccaagaccctcgccgccaaactcgaagaacaccgtgagatg
gccttcctgtcatacgagctggcgaccatcaagatcgacgtgccgctggacatcgagctg
gaccagctgcattgcggcgagcccgaccgcgacacgctgatggagctgtacgccgagctg
gaattcaagagctggatcgaagacctgcagcgcgacgccatgcgtgccgggcaggaactt
gtggtcgaagagcccaccgtggcggctaaagaagccgcatacgaagtcatcctcgagcag
gaccgtttcgatgcctggctgaaaaagcttcaggctgccccgctgttcgccttcgtgacg
cagagcaacggcaacgacgcccagcgcgcgcagctggtcggcctgtcttttgccatacag
acccacgaagcggcttatatcccactgacccactcgtacatgggcgttccgcagcagctg
gatcgggacaccgtgctcaaggcgctcaagccgctgctcgaagacccggacaagaccaag
gtcggtcagcacgccaagttcgccatcaacctgctcgccaactgcgcgatcggcggcgat
caggctcatggcatcgatttgcaaggtgtgcggttcgacaccattctggaatcctacgtg
ctggactccaccgcgacccgccatgatcgcgacagcctggtagccaagtacctcacgcac
acaccggtcaactttcaggacatcgctggcaagggcgccaagcagctgaccttcgaccag
attgccatcgagcaggctggcaactatgccgctgaagaagccgacctgacgctgcgcctg
catgaagtattcgaaacgcgcctggcagcgatcccgaccctgcagccggtactgagcgac
atcgagatgccgctggtgcccgtgctggcccgtatcgagcgccagggcgcgctggttgat
gcaaacctgctgggcatccagagcgtcgaactgggcgacaagatgaccgcactggagtgc
gaagccttcgcgattgccggtgaagaattcaacctgggctcgcccaagcagcttggcgtg
attctctatgagaaactcggcatgccgatcctgagcaaaacggcgaccggccagccttct
actgccgaggccgtgctgtccgaactggccgagcaggacttcccactgcccaaggtactg
atgcagtaccgctcgatgagcaagctgaaaagcacttacacagatcgcctgcccgagcag
atcaacccgcgtacaggccgtgttcatacgtcctatcatcaggcagtggccgtgaccgga
cgcctgtcctccagcgacccgaacctgcagaacatcccgattcgtaccgccgaagggcgt
cgtatccgacaggcattcgtggcgccgaagggttataagctgctggcagcggactattcg
cagatcgaactgcggatcatggcgcacctggccagggacgaaggcctgctgcatgcgttc
cgcaacgacctggacgttcaccgggcgacagcggcggaagtcttcggtgtcgaactggaa
ggcgtcaccaatgacatgcgccgcagcgccaaggcgatcaacttcggcctgatctatggc
atgagcgcgttcggcctggccaagcagatcggtgtggaccgcaagcagtcacaagcctat
gtagaccgctatttcgcccgttaccctggcgtgctggattacatggagcgcactcgcgcc
caggctgccgagcagggctttgtcgaaaccatctttggtcgtcgcctttacctgccggac
atcaacgccaagaacccgtccctgcgcaaaggcgcagagcgcatggcaatcaacgcgccg
atgcagggcacggcggcagacatcatcaaaaaggcgatggtggcggtgaatggctggctg
gaagagtccggcctggatgcgcgggtcattctgcaggtccacgacgaactggtactggag
gttcgcgaagacctggtcgagcagatcagcgagcagatccgtccgcacatgagcggtgcg
gcagaattggccgttccactgctggtggaagtgggtgtcggcaacaattgggacgaggca
cattga
DBGET
integrated database retrieval system
