Pseudomonas coronafaciens pv. oryzae: POR16_01580
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Entry
POR16_01580 CDS
T08147
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02020
Two-component system
pcof02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_01580
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
POR16_01580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_01580
Bacterial motility proteins [BR:
pcof02035
]
Flagellar system
Chemotaxis proteins
MCPs
POR16_01580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBM
MCPsignal
HAMP
4HB_MCP_1
DUF948
ANC1_spectrin
UPF0444
Motif
Other DBs
NCBI-ProteinID:
QGL55112
LinkDB
All DBs
Position
complement(327399..329342)
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AA seq
647 aa
AA seq
DB search
MFRLINQALGNMNVRFKLSLGFGLVLLLTLIITFTGWYGLYTMIDRSESLSDVAQLTSLT
KDLRAERIIDRVQKTPETTAQVTRKIDEMKTHLTSLHRQSTEPATMTLLNEQLQTVSELE
KSFADVRINRQTREQIRQHLDQKSEQASQAVAQVEAEVLKGVSQEQESSERMEEFTNISQ
LRQQIQVARYQVQTYTFTTNDADEAAAINAIDEALKEVEEIARDQRKDQLQGLTPASKAL
KDYRDSLNNFKQIQTKAEADQQSMEVLGEKLLESVATLTRLQTAQRDSEAANARTTLTSI
AALALLIGLTAAWIMTRQITVPLQQTLVVAARIAQGDLSQDMSVTRHDEMGQLQRSMQAM
TVSLRGLIGGISDGVSQIASAAEQLSAVTEQTCAGVNSQKDETDQVATAMNQMAATVQEV
ARNAQNASQAAVQADKQARSGDEVVGKAIAQIEQLAREVANSTQSMIQLKQESGKIVGVL
DVIKSVSQQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIAALQ
TGTQQVATTLDNSRTLTDNTVELSRRAGSALEEITCTVASIQLMNEQIATASEEQSVVAE
QINRNVISVRDISEQTAAASEETAASSVELARLGTHLQGLVGKFRVS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttccgactgatcaatcaagcactcggcaacatgaacgtcaggttcaagttgtcactg
ggtttcggcctggtgctgctactgacgctgatcatcacgtttaccgggtggtatggcctg
tacacgatgattgaccgatccgagtcgctttccgatgttgcccagctcaccagcctcacc
aaggatttgcgcgccgagcggatcatcgaccgtgtacagaaaacgccggagacgaccgct
caggtgacaagaaaaatcgatgaaatgaagacccatctgacatcgctgcaccggcagagc
accgagccggcaacaatgaccctgctcaacgagcagcttcagacggtgagcgaactggag
aaatcattcgccgacgtacgtatcaatcgacaaacccgagagcaaatacgccagcacctg
gatcagaaatcagagcaagcctcgcaggccgttgcgcaggtcgaagctgaagtgctcaag
ggcgtaagccaggagcaggaaagcagcgagcgaatggaggaattcaccaacatatcgcag
ctgaggcagcagattcaggttgcgcgttatcaggtgcagacctacacattcactaccaac
gatgccgatgaggccgccgccatcaacgccatcgacgaagcgctaaaggaagtcgaggag
atagccagggaccagcgtaaagaccagcttcaaggtctgacacctgcctcgaaagcgctg
aaggactaccgggacagcctgaacaacttcaaacagatacagaccaaagccgaggctgat
cagcagtccatggaagtcctcggggagaaactgctggaatcggtagcgacactgacccgc
ctgcaaactgcgcaacgtgacagcgaggcggcaaacgccaggactaccctcaccagcatt
gcggctctggcgctactgattggattgacagccgcctggatcatgacccggcagatcacc
gttcccttgcagcagaccctggtggtggcagcacgaatcgctcagggcgatctgagtcag
gatatgtcggtcacacgccatgatgaaatgggtcagctgcagcgcagcatgcaggccatg
actgtcagcctgcgcgggttgatcggcggaatcagcgatggtgtatcgcaaatcgccagc
gcagccgaacagctttcggccgttacagaacagacatgcgccggggtcaacagccaaaaa
gatgagaccgatcaagtggccactgccatgaaccagatggcggccactgtgcaggaagtg
gcgcgcaatgcgcaaaatgcatcgcaggctgcagtgcaggcggataaacaggcgcgcagc
ggcgatgaggtcgtcggcaaggccattgcgcagatcgagcaactggctcgcgaagtggca
aactctactcagtcaatgatccagctcaagcaagaaagcggcaagatcgtaggtgttctt
gacgtgatcaaatccgtatcgcagcaaaccaacctgctggcactgaacgccgccatcgaa
gccgctcgtgcaggggaagccgggcgcgggtttgccgtggtcgctgatgaagtgcgcggc
ctggcacaacgcacacagaagtccaccgaagaaatcgaggagctgatcgccgccctgcaa
accggcacccagcaggttgcaaccacactcgacaatagccgcactttgactgacaacacc
gtcgagctgagccgccgcgcgggcagtgcactggaggagatcacatgcaccgttgcctct
atccagctcatgaatgaacagatcgccacggccagcgaagaacaaagtgtggtggccgaa
cagattaatcgtaacgtgatcagcgtccgcgacatctcggagcaaaccgctgccgccagc
gaagaaacagcagcctccagcgtcgaactggccaggctgggcacccatctgcaagggttg
gtggggaaattcagagtgagctga
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