Pseudomonas coronafaciens pv. oryzae: POR16_02410
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Entry
POR16_02410 CDS
T08147
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00730
Thiamine metabolism
pcof01100
Metabolic pathways
pcof01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
POR16_02410 (thiC)
Enzymes [BR:
pcof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
POR16_02410 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QGL55272
LinkDB
All DBs
Position
528989..530878
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AA seq
629 aa
AA seq
DB search
MSTKPKNTAHLSESAQVDSGSVQPFTRSQKIYVQGSRPDIRVPMREVTLDITPTDFGGEI
NAPVTVYDTSGPYTDPNVIIDVRKGLADVRSPWIDSRNDTERLPGLSSNFGQQRLSDAEL
TALRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIRENMKLQEARAAGLLTQQHA
GHSFGASIPKEITAEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGA
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HQENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKH
DVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAKGLAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaaaccaaaaaacacagcccatttgagcgagtcggcgcaggtcgattccgga
tcggtacagccgtttacccgttcgcagaaaatctatgttcagggctcacgcccggacatc
cgcgtgccgatgcgcgaagtgaccctggatatcacgccgaccgattttggtggcgaaatc
aacgcaccagtaactgtctacgacacctcaggcccctacaccgaccccaacgtgattatc
gacgtgcgcaaaggtctggccgacgtccgttcgccttggatcgactcgcgcaatgacacc
gagcgtctgcctggcctgagctccaacttcggtcagcaacgcctgagcgatgccgagctg
accgcgctgcgctttgcacatgtgcgcaacccgcgccgcgccaaggccggcgccaacgtc
agccagatgcactacgcgcgtcagggaattatcaccgccgagatggaatacgtcgccatc
cgcgaaaacatgaagcttcaggaagcccgcgccgcgggtctgctgacccagcagcatgcc
gggcacagcttcggagccagcattcctaaggaaataaccgccgagttcgtgcgtgaagag
atcgcccgtggccgcgcgatcatcccggccaacatcaaccacgtcgagctggagccgatg
atcatcggccgtaacttcctggttaagatcaacggcaacatcggcaacagtgcgctgggt
tcttccatcgaagaagaagtcgccaaactgacctggggcattcgctggggttcggacacg
gtcatggacctgtccacaggcaagcacattcatgaaacgcgcgagtggatcatccgcaat
tcgccggtgccgattggcactgtaccgatttatcaggcgctggaaaaagtcggtggtgcc
gccgaagacctgacctgggagctgttccgcgacacgctgatcgagcaggccgagcagggc
gtcgattacttcactattcacgccggtgtactgctgcgttatgtgccgctgaccgccaag
cgtgtgaccggtattgtcagtcgtggtggttcgatcatggccaaatggtgcctggcgcat
caccaggaaaacttcctgtacacgcatttcgaagacatctgcgaaatcatgaaggcttac
gacgtcagcttctcgctgggcgatggcctgcgtccgggctcgattgccgacgccaacgat
gcggcgcaattcggtgaactggaaaccctcggcgaactgaccaagattgcctggaaacac
gacgtgcagaccatgatcgaaggcccgggccatgtgcctatgcagttgatcaaagagaac
atggacaagcagctggagtgctgcgatgaagcaccgttttacaccctcggcccgctgacc
accgatatcgcgccgggttatgaccacatcacctcgggcattggtgcggcgatgatcggc
tggtttggttgcgccatgctgtgttacgtcacgcccaaggaacacctggggttgccgaac
aaggatgacgtgaagaccgggatcatcacctacaagatcgctgcccatgcggctgacctg
gccaaaggtcatccgggcgcacagattcgcgacaacgcgctgagcaaggcgcgtttcgag
ttccgctgggaagaccagtttaacctcggcctggaccctgataccgcgcgctcttatcac
gatgaaaccctgcccaaggactctgccaaggtcgcgcatttctgttccatgtgcgggccg
aaattctgctcgatgaaaatcacccaggaagtgcgtgaatacgccgccaaccagcggatt
gaagcagtggatgtagatgttgccaaaggcctggccgaacaggccgagcgcttcaaacag
gaaggcagccagttgtacaagaaagtgtag
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