Pseudomonas coronafaciens pv. oryzae: POR16_02530
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Entry
POR16_02530 CDS
T08147
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
POR16_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcof03019
]
POR16_02530
03009 Ribosome biogenesis [BR:
pcof03009
]
POR16_02530
Messenger RNA biogenesis [BR:
pcof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
POR16_02530
Ribosome biogenesis [BR:
pcof03009
]
Eukaryotic type
Pre-60S particles
RNases
POR16_02530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DHOR
Motif
Other DBs
NCBI-ProteinID:
QGL55295
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All DBs
Position
558383..558919
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AA seq
178 aa
AA seq
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MQNKQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAVHQSDETLAKMDEW
NTRQHGGSGLTQRVRESTISMADAEAQTLEFIKLWVPERSSPICGNSICQDRRFLYRHMP
TLENYFHYRNLDVSTLKELAARWSPELKFKKGSTHLALDDIRESIAELRFYREHFIKP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaagcagaacctgatctggatcgatctggaaatgaccggtctggaccctgat
accgatgtcatcatcgaaatggccacgattatcacggacagtgagctcaacacactggcc
gaagggccggtgatcgccgtgcatcaaagcgacgagacgctggcaaagatggacgagtgg
aatacgcgccagcacggcggttctggcctgacccagcgcgtgcgcgaaagcaccatcagc
atggctgacgctgaggcgcagactctggaattcatcaagctgtgggtgcccgagcgcagt
tcgccgatctgcggtaacagcatctgtcaggatcgtcgcttcctttatcgtcacatgccg
acgctcgaaaactacttccactaccgcaacctcgacgtctcgaccctcaaggaactggct
gcccgctggtcccccgagctcaagttcaagaagggcagcacgcatctggcgctggatgac
attcgcgagtcgattgccgagttgcgtttctaccgagagcatttcatcaagccgtga
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