Pseudomonas coronafaciens pv. oryzae: POR16_03200
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Entry
POR16_03200 CDS
T08147
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
POR16_03200
Enzymes [BR:
pcof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
POR16_03200
Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
POR16_03200
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QGL55415
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All DBs
Position
707075..708103
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AA seq
342 aa
AA seq
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MRAMPIRQSLKLLALSGLALLVASCSSPSRTTSTQAPKGGAVVRSMPGLDINRAHKDGAP
WWDVDVSRIPDATPTLHTGVYKANPYTVLGKTYFPMSDSKRYVATGTASWYGTKFHGQNT
ANGEVYDLYGMSAAHKTLPLPSYVKVTNLDNNRTVILRVNDRGPFYSDRIIDLSYAAAKK
LGYAETGTARVKVEGIDPQEWWAQRGRPAPLLLNQPQVTAQATPPALSTSTGIVEQYTPP
PQQHAAPVVPLQVDAKKNASGQAAGLFLQVGAFANPDAAELLRSKLSGMVRAPVFVSSIA
RNQQTLYRVRMGPIDTPGEAQQLQNSVRSANLGQPSVVTSDQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcaatgccaatccgtcaatcattaaagctgctggcgttgagtggcctcgcgttg
ctggttgccagttgctcctcgccatcgcgcacgaccagtacgcaagcgccgaaaggcggt
gccgtcgtgcgctcgatgccggggctggacatcaaccgtgcccacaaggacggcgcgccg
tggtgggacgtggatgtttcacgcatccccgatgcgacgccgaccctgcacacgggtgtc
tataaggccaacccgtataccgtgctgggcaagacctactttccgatgagcgattccaag
cgctacgtcgcgacgggcaccgcgtcctggtatggcaccaagtttcacgggcagaatacc
gccaatggcgaggtgtatgacctgtacggcatgagtgccgcacacaagaccctgccgttg
cccagctacgtcaaagtgaccaatctggacaacaaccgcactgtgattctgcgcgtcaac
gaccgcggcccgttctattcggaccggatcatcgatctgtcctacgcagcagcgaaaaaa
ctcggttatgccgaaaccggcactgcacgggtcaaggtcgaaggtatcgaccctcaggag
tggtgggcacaacgtggccgaccggcaccgttgctgcttaatcagccgcaggtgactgcc
caggccacgccgcccgcgctgtccacctcgaccggaatcgtcgagcagtacacgccgcca
ccccagcagcacgcagcacccgtcgtgcccttgcaggttgacgcaaaaaaaaacgcttca
ggacaagccgctgggctgtttctccaggtgggagccttcgccaatccggacgctgcggaa
ctcctgaggtcgaaactgagcgggatggttcgagcgccggtcttcgtcagctcgatagct
cgcaatcagcaaacgctctatcgggtgcggatgggaccgatcgacacgccgggtgaagcc
cagcagctgcaaaacagcgttaggtcggccaatctgggtcagccaagcgtagtgacatcg
gatcagtaa
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