Pseudomonas coronafaciens pv. oryzae: POR16_04205
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Entry
POR16_04205 CDS
T08147
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02020
Two-component system
pcof02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_04205
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
POR16_04205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_04205
Bacterial motility proteins [BR:
pcof02035
]
Flagellar system
Chemotaxis proteins
MCPs
POR16_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
DUF5838
BORCS6
DUF7498
Motif
Other DBs
NCBI-ProteinID:
QGL55590
LinkDB
All DBs
Position
complement(957449..959074)
Genome browser
AA seq
541 aa
AA seq
DB search
MNLRSLNISRRASLCFGIITMILIGLGVFSYIQIGHLRAAEQNIEENSLPSVQVVDDIQI
ALLHARLESIRMLASTDSTVRSTAASSAREAIDTLQGRSEFYRKNLISDEQDRVQFEEAH
NKMDNYVAGVKQIITTDATDHEKALSFANNEQVQRANAYQADLNTLRGRNAKDAQRSGED
ATAVYNHSVNVLVAVVIVASILTVFLAIALTRSIVRPISASLELAEDIAAGDLTRQLEVS
GKDEAARLMTSLNTMSSNLRDTIRQISGASAQLSTAAVEMTSITESADRTLQQQNSEIEQ
AATAVNEMSAAVEEVARNATSTSAAAQQSSVSADLGNQRVAETLTAMQNLTGLVEGSSAQ
VTALAGQAQDISKVLGVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRT
QTSTQEVEQMISAIQAGSSATVESMQKSTLEVHNTRKTAEDAGQSLRQITDSVLEINNRN
LQIATASEQQAHVARDVDRSLISIRNLAVQSSEGTRQTLEASNELSELAVNLNDLVLRFK
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaggtcgttgaatatctcgcgcagagcatccttatgctttggcatcatcacc
atgatcctgataggcctgggcgtgttttcgtacattcagatcggacacctgcgtgcggca
gagcagaacatcgaggagaactcactgcccagcgttcaggtcgtcgacgacatccagatc
gccctgcttcatgctcgcctggaaagcatccgcatgctggccagcaccgactctaccgta
cgaagcacggcggcgagcagcgcccgggaagccattgacacgctgcaggggcgcagtgag
ttctaccgaaagaatttgatctccgacgagcaggaccgggtgcagttcgaggaggcccac
aacaagatggacaattacgtggccggcgtgaagcagataatcacgaccgacgcgacagac
cacgaaaaagccctgtctttcgccaacaacgaacaggttcagcgagccaatgcctatcag
gccgacctcaacacgctgcgcggtcgtaacgcaaaagacgcccaacgctcaggcgaggac
gcaacagcggtctataaccacagcgtcaatgtgttggtggctgtcgtcatcgttgcgtcg
atcctcaccgtattcctcgccattgcactgacgcgcagcattgttcgcccgatcagcgct
tctctggagctagcagaagacattgctgcgggtgatctgacccggcaactggaagtctcc
ggcaaggatgaggcggcccggctgatgacctcgctgaacacgatgtcgagcaacctgcgc
gataccatccggcaaatttccggcgcgtccgctcaactgagcactgccgccgtcgagatg
acctcgattaccgaaagcgccgaccgcacattgcagcaacagaacagcgaaattgaacag
gccgcaactgcggtaaatgaaatgagcgccgccgtagaagaggtcgctcgcaacgccacg
tcaacgtctgcggctgctcagcagtccagtgtttccgccgatctgggcaaccagcgtgtc
gccgaaaccctgaccgccatgcagaacctgaccgggctggtagagggctcttccgcacag
gtcacggcccttgcgggccaggcgcaggacatcagcaaagtgctgggcgtgattcgcggg
attgccgagcagaccaacctgctggcactcaacgccgccattgaagccgcgcgtgcaggc
gaacagggccgcgggtttgccgtggtggcggatgaagtgcgcgcactggcgcatcgcaca
cagacttccactcaggaagtggaacagatgatttcggcgatacaggctggctcgtccgcc
acggtcgaatccatgcaaaagagcactcttgaggtacacaacacgcgcaaaacggctgaa
gacgccgggcagtcgttgcggcagatcaccgattcggtattggagatcaacaaccgcaac
ctgcaaatcgccacggcgtccgaacaacaggcgcatgtggcaagagatgtggacagaagc
ctgatcagtatccgtaacctggccgtgcaaagcagcgagggcacacgccagacactggaa
gccagtaacgagctttcggaactggcggtaaatctgaacgatttagtattgcgattcaaa
acctga
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