Pseudomonas coronafaciens pv. oryzae: POR16_04470
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Entry
POR16_04470 CDS
T08147
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcof03016
]
POR16_04470 (truB)
Enzymes [BR:
pcof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
POR16_04470 (truB)
Transfer RNA biogenesis [BR:
pcof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
POR16_04470 (truB)
Prokaryotic type
POR16_04470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
CheY-binding
Motif
Other DBs
NCBI-ProteinID:
QGL55637
LinkDB
All DBs
Position
1013796..1014713
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGKTTNTADAEGEVLLTRPVTVGRDDIEAVLPHFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLDCEGETARFSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPQFGMVRVQDHEGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgtcgcaatgtcagcgggatcatcctgctcgacaagccg
ctgggcttcacttccaacgccgcactgcagaaggtccgctggctgctcaatgccgagaaa
gccgggcacacgggcagtcttgatcctctggcaaccggcgtcctgccgttatgctttggc
gaggctaccaagttctctcagtacttgctcgattcggacaagtcctacgagaccctggcg
caactcggtaagaccactaacacggccgacgccgagggtgaggttttgctgacccgtccg
gtgaccgttggtcgcgacgatattgaagcggttcttccgcattttcgcgggcaaatcagc
cagatacctcccatgtactcagccctcaagcgtgacgggcagccactttacaagctggcg
cgtgcaggggaagtagtggagcgcgagcctcgttctgttactattgcgcgcctggaatta
cttgattgcgaaggcgagacagcccgtttttcggtggactgcagtaaaggcacctatatc
cgtacgctggtcgaggatattggtgagaagcttggttgtggtgcttacgtcgcagagctg
cgccgtacccaggccgggcctttctcgctggcacaaacagttaccttggaagagctggag
caagtgcatgccgacggcggcaatgaagcggtagaccgctttttgatgccttcggacagt
ggcttgctggactggccgctgctgaagttttccgagcacagttcgttttactggctgcat
ggtcagccagtacgcgccccggacgcgccgcaattcggcatggtacgggtgcaggatcac
gaaggtcgcttcatcggtatcggtgaagtcagcgaagacgggcgcattgcgccgcgtcga
ttgattcggtcagagtga
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