Pseudomonas coronafaciens pv. oryzae: POR16_04480
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Entry
POR16_04480 CDS
T08147
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POR16_04480 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcof03019
]
POR16_04480 (pnp)
03016 Transfer RNA biogenesis [BR:
pcof03016
]
POR16_04480 (pnp)
Enzymes [BR:
pcof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
POR16_04480 (pnp)
Messenger RNA biogenesis [BR:
pcof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
POR16_04480 (pnp)
Transfer RNA biogenesis [BR:
pcof03016
]
Prokaryotic type
tRNA degradation factors
POR16_04480 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
OB_RRP5_4th
KH_PNO1_2nd
S1_2
Motif
Other DBs
NCBI-ProteinID:
QGL55639
LinkDB
All DBs
Position
1015317..1017422
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVILETGRIARQASGAVLVTVDDDVSVLVTVVGAKHADAGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKIDPDIAAMIGTSAALAISGIPFDGPVGAARVAFHESTGYLLNPTYEQLQASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAIKELAAEAAKPTWDWQPKPEA
TALLGAIRAEFGDAISQAYTITVKADRYARLGELKDQVVAKLAVEEGSPSASEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPGAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTSKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRNELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ESKEAAEAARQRVLGITAEAEIGKIYLGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGEEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaagtttcagttcggtcaatcgaccgtaatcctcgagacaggc
cgtatcgcccgtcaagcctctggcgcagtattggtcaccgttgacgacgacgtcagcgta
cttgtgactgtggtcggcgccaaacatgctgacgctggcaaaggcttcttccctctgtcc
gtgcactaccaggaaaaaacctacgctgccggcaagattcccggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacctcgcgtctgatcgaccgtccgatccgt
ccgctgtttccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtctccacc
agcaagaaaatcgatccggacatcgctgcgatgatcggtacgtctgctgctctggccatc
tccggtattccgttcgacggtccggtcggtgctgcgcgcgttgctttccacgaaagcacc
ggctacctgttgaacccgacctacgagcagttgcaggcttcgagcctggacatggttgtg
gccggtacttccgaagccgttctgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgctgtgctgttcgcccacgacgagttccaggtggtcatcaacgccatc
aaggaactggctgccgaagccgccaagcctacatgggactggcagcctaagcctgaagcg
accgcactgctgggcgctatccgtgccgagtttggcgacgcgatctcccaggcttacacc
atcaccgtcaaggccgaccgctatgcgcgtctgggcgagctgaaagatcaggtcgttgcc
aagctggctgttgaagaaggcagcccgtctgccagcgaagtcaaagcggctttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccgcgtatcgacggccgt
gacacccgcaccgtacgtcctctgaacatcgaagtcggcgttctgcccaagactcacggt
tcggcactgttcacccgcggcgaaactcaggcgctggttgttgccactttgggtactgcc
cgtgacgcacagttgctcgacacccttgaaggcgagaaaaaagaccccttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggcggtgctggccgtcgc
gagatcggtcacggtcgtctggctcgtcgcagcgtacaggccatgctgccgggcgctgat
gtgttcccgtacaccatccgtgttgtgtcggaaatcaccgagtccaacggttccagctcc
atggcttcggtctgcggtgcatccctggcactgatggacgctggtgttccgatgaaagcg
ccggttgccggtatcgccatgggcctggtcaaggaaggcgagaagttcgccattctgacc
gacatcctgggtgacgaagatcacttgggcgacatggacttcaaggtagccggtacctcc
aaaggtgttaccgcgctgcagatggacatcaagatcaagggcatcaccgaagaaatcatg
gagatcgctctgggccaggccctggaagctcgcctgaatatcctcggtcagatgaaccag
atcatcggtcagtcgcgtaacgagctgtcggccaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaagatccgtgacgtgatcggcaagggtggcgcaaccatccgtgcaatc
tgtgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaatccaaggaagcggctgaggctgcacgtcagcgcgttctgggtatcaccgcagaagca
gagatcggcaagatctacctcggcaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacattctgcctggcaaggacggtctggttcacatctccatgttgagcgacgctcgcgta
gagaaagtgaccgacatcctgaaagagggtgaagaagtcgaagtactggtactggacgtg
gataaccgcggccgtatcaagctgtctatcaaagacgtagccgcagcgaaagcgtcgggc
gtctga
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