Pseudomonas coronafaciens pv. oryzae: POR16_05580
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Entry
POR16_05580 CDS
T08147
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
POR16_05580 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcof03400
]
POR16_05580 (recO)
DNA repair and recombination proteins [BR:
pcof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
POR16_05580 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
POR16_05580 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QGL55844
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All DBs
Position
1252559..1253242
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AA seq
227 aa
AA seq
DB search
MSTPTGQPAYVLHSRAYRENSALVDFLTPQGRLRAVLRSAKGKAGSLARPFVPLEVEFRG
RGELKNVGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFDHYAATLIALAL
GRPLEPLLRSFEWRLLDDLGYGFAMDADINGDPLAVDGMYRLQVDAGLERVYLLQPGLFQ
GAELLAMSEADWSVPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccccaccggccaacctgcttatgtgctccatagccgtgcgtaccgtgaaaac
agcgcactggtcgatttcctgaccccgcagggccgcctgcgtgccgtgttgcgcagtgcc
aaaggcaaggctggctcgctggcacgtccgtttgtgccgcttgaagtcgagtttcgtggt
cgcggcgaactgaaaaatgtcggtcgcatggaaagtgcaggcgttgcgacctggatgacc
ggcgaagccctgttcagtggcatgtacctcaacgaattgctgattcgcctgctacccgcc
gaagacccgcaccctgctgtgttcgatcactatgccgctacgctgattgcgcttgcgctt
ggccgtccgctggagccgttgctgcgttcgtttgaatggcggttgctggatgacctcggc
tacggctttgccatggacgccgatatcaatggtgatccgctggcggtcgatggcatgtac
cgcctgcaagtggatgccggcctcgagcgcgtttacctgctccagcccggtctgtttcaa
ggcgccgagctgttggcgatgtctgaggccgactggagtgttccgggtgccttgtcggcg
gccaaacgtctgatgcgtcaggcgctggccgtgcatctcggcgggcggccgctggttagt
cgtgaactgtttcgcaagccgtga
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integrated database retrieval system
