Pseudomonas coronafaciens pv. oryzae: POR16_06175
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Entry
POR16_06175 CDS
T08147
Name
(GenBank) type III helper protein HopAK1
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
POR16_06175
Enzymes [BR:
pcof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
POR16_06175
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QGL55956
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All DBs
Position
complement(1374961..1376559)
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AA seq
532 aa
AA seq
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MNMINRNYYPVSGLSNQSITPETDAHPPADLEPGHTGNQVDFSPPQRATALQSPLDTASS
RARPASSNTPESATGLLLNKLVEAIRNILKDLFPKSSAHPQDGSTHSPAQSRGEQAPNAS
QPSSSPSTTAPASPSAAQGKTEKPFVVQNDPTADKTATLPEKTAGAPSDTSNRQLKAADK
TQDTPDASETSATAPAQLKTSMSAVDRPDAAEKVARPATSAAHGPGADMSGMLGFAKEAN
TTGGNNGEVVTVNTVADLKKNMEDDTARTIRLGANLTADSKVTINFGANKTLLGTDKGNG
LHNIYLASGKNAGNDIFQNLNFTHDSRYRENGDMQMFISSGQKYWIDHNTYTGTKDQNPK
GLDKLLYVGGKADNVTLTNSKFQNNEYGAIFGQPDDSAAAKAEYKGYPRMTIADNVFSNL
DVRGPGLFRQGEFDVFNNSIDKFHLGFTATGNATILSQANYFSNGVDVSHKASNRGVLDD
YGDAHFKDIGSNVSFTQKSSTTEWTPSYNRDIKTAQEARAYDQANAGAKALS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgatcaacagaaactattatcccgtctccggactgtcgaaccaaagcatcact
ccagagaccgacgctcacccgccagccgatctggagcccggccatactggcaatcaagtc
gatttcagcccgccgcaacgtgcaacggcgttgcagtcaccacttgatacagccagctct
cgcgctagaccggcctcttcaaacacgccagaaagcgccactggcctgttactgaacaag
ctcgtcgaagccattcgcaacattctcaaagacctatttccaaaatcgtcggcacatcca
caagacggctcgacgcattcgcctgcgcagtcacgaggcgaacaggcaccaaacgcttcc
caaccgtcatcgtcgccttcgacaacggcccccgcatcaccctcagctgcccagggcaaa
acagaaaagcctttcgtggtgcagaacgacccaacagcggacaaaactgcgacgctgcct
gaaaaaaccgcaggggcgccttctgatacgtcgaataggcaactcaaggctgctgataaa
acgcaggacacgcctgatgcgtcggagacgtcagccacggcacccgcacagctgaaaacg
tcaatgtctgccgtcgacagacctgacgcggcagaaaaggtggcaaggcccgcaacctct
gccgctcatggccctggggcggatatgtcgggcatgctcggtttcgccaaggaagcaaac
accaccggcggcaacaatggcgaagtcgtcaccgtcaataccgtggcggacctcaagaag
aatatggaagacgacaccgcccgcactattcgcctcggcgccaacctgaccgccgacagc
aaagtaaccatcaacttcggtgccaataaaaccctgctgggcaccgacaagggcaacggc
ctgcataacatctatctggccagtggcaagaacgcaggcaatgacatttttcagaacctg
aacttcacccatgacagccgttaccgtgaaaacggcgacatgcaaatgttcatcagcagt
ggccagaaatactggatcgaccacaacacctacaccggcaccaaggatcagaaccccaaa
gggttggacaaacttctgtacgttggcggcaaggcagataacgtcaccctgaccaattcg
aaattccagaacaacgagtatggcgcgattttcggccagccagacgattcggcagctgcc
aaggccgagtacaagggttacccgcgaatgaccatcgccgacaacgttttcagcaacctt
gatgttcgcggacccggtctgtttcgtcagggagaatttgacgtattcaacaactcgatc
gacaaattccacctcggtttcactgcaaccgggaacgcgaccatcctgtcgcaggccaac
tatttcagcaacggcgtcgatgtttctcacaaggcaagtaatcgcggcgtgctggatgac
tatggcgatgcgcactttaaggacatcggcagcaatgtcagcttcactcagaaatcatct
acgaccgaatggacgccgagctacaaccgcgacatcaagacggcgcaagaagcgagagcc
tatgaccaggccaatgcaggcgccaaagctctgagctga
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