Pseudomonas coronafaciens pv. oryzae: POR16_06190
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Entry
POR16_06190 CDS
T08147
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00061
Fatty acid biosynthesis
pcof00071
Fatty acid degradation
pcof01100
Metabolic pathways
pcof01212
Fatty acid metabolism
pcof02024
Quorum sensing
pcof04146
Peroxisome
Module
pcof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
POR16_06190
00071 Fatty acid degradation
POR16_06190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
POR16_06190
09145 Cellular community - prokaryotes
02024 Quorum sensing
POR16_06190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcof01004
]
POR16_06190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcof04147
]
POR16_06190
Enzymes [BR:
pcof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
POR16_06190
Lipid biosynthesis proteins [BR:
pcof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
POR16_06190
Exosome [BR:
pcof04147
]
Exosomal proteins
Exosomal proteins of breast milk
POR16_06190
Exosomal proteins of breast cancer cells
POR16_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QGL55959
LinkDB
All DBs
Position
1379662..1381353
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AA seq
563 aa
AA seq
DB search
MIENFWKDKYPSGIPADINPDEYPNVQAVLKQSCQRFADKPAFSNLGKTITYGELYELSG
AFAAWIQQHTDLQPGDRIAVQLPNVLQYPIAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTHIQQVIVTEVADMLSPLKRLVINSVIKYVKKMVPAYH
LPHAIRFNEVLGKGRGQPVTEVAPGSSDVAVLQYTGGTTGIAKGAMLTHRNLIANMLQCR
ALMASNLDEGCEILITPLPLYHIYAFTFHCMAMMLLGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNENFRNLDFSALKVTLSGGMALQQAAAERWKQVTDCPICEGYGM
TETSPVATVNPSQYIQMGTIGIPVPSTLCKVIDDAGNELAFGETGELCIKGPQVMKGYWQ
RQDATDEMIGSDGWLKTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGESIKVFVVAKPGVTLTKDKVMEHMRANLTGYKVPRSVEFRDILPT
TNVGKILRRELRDEELKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaacttctggaaggataagtacccgtccggcattcctgccgatatcaacccc
gacgagtaccccaacgtccaggcggttctgaaacagtcctgccagcgtttcgctgacaaa
ccggcattcagcaatctgggcaagacgatcacgtacggcgagctgtacgagctgtccggt
gcgtttgccgcctggatccagcagcacaccgatctgcagccgggcgaccgtatcgccgtg
cagttgcccaacgtgctgcaatacccgatcgccgtcttcggtgccattcgcgccggcctg
atcgtggtcaataccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgat
tccggggccaaggcgctggtgtgcctggcaaacatggcgcatctggccgaaaaggtcgtg
cccaagacccacatacagcaggtcatcgtcactgaagtggccgatatgttgtcgccgctc
aaaaggctggtgatcaacagcgtcatcaagtacgtgaagaaaatggtcccggcctatcac
ctgccgcacgccatcaggttcaacgaagtgctcggcaaaggccgaggtcagccggttacc
gaagtagcgccaggcagcagcgatgttgccgtgctgcaatacaccggcggcaccaccggt
atagcaaagggcgccatgctgacccaccgcaacctcatcgccaacatgctgcaatgtcgg
gcattgatggcttccaacctggatgagggctgtgaaatcctcatcacgccgctgccgctg
tatcacatctacgcgttcacctttcactgcatggcgatgatgctgctgggcaatcacaac
atcctgatcagcaacccgcgcgatctgccggcgatggtcaaggagttgtcgaaatggaag
ttcagcggttttgtcggcctcaacaccctgtttgtggcgttgtgcaataacgagaacttt
cgcaacctcgacttctcggcactgaaagtcactctgtcgggtggcatggccttgcagcag
gctgccgccgagcgctggaagcaggttaccgactgccccatctgtgaaggctatggcatg
accgagaccagcccggtggcgacggtcaatccttctcaatacatccagatgggcactatc
ggcattcctgtgccgtcgacgctgtgcaaggtcatcgatgatgccggcaacgagctggcg
tttggcgagacgggcgaactgtgcatcaaaggcccgcaggtcatgaaaggctactggcag
cgtcaggatgctaccgatgaaatgatcggcagcgatggctggctcaagaccggcgacatc
gcgatcattcagcctgatggctatatccggattgtcgaccgcaagaaggacatgatcctg
atctccggcttcaacgtgtaccccaacgaactggaagacgtactcgccacacttcccggc
gtgctgcaatgcgcggccattggcgtgccggacgagaagtcgggtgaaagcatcaaggtc
tttgtcgtcgccaaaccgggcgtcacgctgaccaaggacaaggtcatggagcatatgcgc
gccaacctgaccggctataaagtgccacgcagtgtcgaattccgcgacatcctgcccacc
accaatgtcggcaagattctgcgtcgcgagttgcgtgatgaagaactgaaaaagctgggt
gtgaagaagtaa
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