Pseudomonas coronafaciens pv. oryzae: POR16_07075
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Entry
POR16_07075 CDS
T08147
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
POR16_07075 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pcof03011
]
POR16_07075 (rpsA)
Ribosome [BR:
pcof03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
POR16_07075 (rpsA)
Bacteria
POR16_07075 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QGL56119
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Position
1578502..1580193
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AA seq
563 aa
AA seq
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MSESFAELFEESLKTLNLQAGSIITAIIVDIDYQAGWVTVHAGLKSEGLIPLEQFHNDAG
ELTIKIGDEVHVALDAVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG
GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN
SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG
DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEE
GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS
GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV
ILSVDPERERISLGIKQLESDPFSEYVTVNDKGAIVRGIVKEVDAKGAIITLADDIEATL
KASEISRDRVEDARNVLKEGEEIEAKIISVDRKSRVISLSIKSKDVEDEKEAIQSLRSKP
EVAESTGPTTIGDLLRAQMEKQN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcagaactttttgaagaaagcctaaagaccctcaaccttcaggcc
ggttcgatcatcaccgcgataatcgtggatatcgactaccaggctggttgggttacggtt
cacgccggtctgaaatctgaaggcctcatcccgctggaacagttccacaacgacgctggc
gagctgaccatcaagatcggcgatgaagttcacgttgcgctggacgcggtcgaagatggc
tttggcgaaaccaagctgtcccgcgaaaaagccaagcgtgccgagtgctggatcgttctg
gaagcggctttcgcagctgaagaagtggtcaagggcgttatcaacggtaaggttaagggc
ggcttcactgtcgacgttaacggcatccgtgcgttcttgcctggttctctggttgacgtc
cgccctgtgcgtgacacgactcacctggaaggcaaagagctcgagttcaaggtcatcaag
ctggaccagaagcgcaacaacgttgtcgtttcccgtcgcagtgtcctggaagccgagaac
agtgccgagcgcgaagctctgctcgagtccctgcaggaaggccagcaagtcaaaggtatc
gtcaagaacctcaccgattacggcgcattcgtcgatctgggtggcgtcgatggcctgctg
cacatcaccgacatggcctggaagcgcatcaagcatccatcggaaatcgtcaatgttggc
gatgagatcgatgtaaaggtcctgaagtatgatcgcgagcgcaatcgtgtttccctgggt
ctgaagcaactgggtgaagacccatgggttgctatcaaggctcgctacccggaaagcacc
cgcgttaccgcgcgtgttaccaacctgaccgactacggctgcttcgcagagctggaagaa
ggcgtggaaggcctggtacacgtttccgaaatggactggaccaacaagaacatccaccct
tcgaaagtcgttcaggttggcgacgaagtggaagtcatggttctggacatcgacgaagag
cgtcgtcgtatctccctcggcatcaagcagtgcaaatccaacccatgggaagatttctct
ggccagttcaacaagggcgataaaatctccggcaccatcaagtcgatcaccgatttcggt
atcttcattggtctggacggcggcatcgacggtctggttcacctgtccgacatctcctgg
aacgaagtgggcgaagaagccgtacgtcgcttcaagaagggcgacgagctcgacactgtg
attctgtcggttgatcctgagcgtgagcgcatctcgctgggtatcaagcagctggaaagc
gatcctttctccgagtacgtcactgtcaatgacaaaggcgcaatcgttcgcggtatcgtt
aaagaagttgacgccaaaggcgccatcatcactctggccgacgacatcgaagcgaccctc
aaagcctccgaaatcagccgtgaccgcgttgaagacgcgcgtaacgttttgaaagaaggc
gaagagatcgaagccaagatcatcagcgttgaccgcaagagccgcgtaatcagcttgtcc
atcaagtcgaaagacgttgaagacgagaaagaagcaatccagagcctgcgtagcaagcct
gaagttgctgaaagcactggtcctaccactattggtgacctgctgcgcgcgcaaatggaa
aaacagaactaa
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