Pseudomonas coronafaciens pv. oryzae: POR16_07425
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Entry
POR16_07425 CDS
T08147
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21825
AraC family transcriptional regulator, L-arginine-responsive activator
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcof03000
]
POR16_07425
Transcription factors [BR:
pcof03000
]
Prokaryotic type
Helix-turn-helix
AraC family
POR16_07425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_23
HTH_Crp_2
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
QGL56184
LinkDB
All DBs
Position
1642938..1643930
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AA seq
330 aa
AA seq
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MTAHRIGFLVWPGTKALTLALAEEALRVAQRVHPEVVYELSFLQAEAADAAPVTGGWQLP
GEPWAGQLEGLHKLFLLADEPPAAVAPALSSALKQLVRAGCSIGGLSAGVYPLAQLGLLD
GYRAAVHWRWQDDFAERFPKVIATSHLFDWDRDRLTACGGMSVLDLLLAVLSRDHGAELA
GAVSEELVVERIREGGERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVCV
SRRQLERIFKQYLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYR
NFFGATPREDRNQRRSSSPFELSPVPAERG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccatcgaatcggtttcctcgtctggcctggcaccaaagccctgaccctggcg
cttgccgaggaagccctgcgcgttgctcaacgcgtacatcctgaagtggtctacgaattg
tcgtttctgcaggccgaggctgccgacgctgctcccgtcactggtgggtggcagttgccg
ggtgagccgtgggccgggcagctggaaggtttgcacaagctgtttctgctggctgatgag
ccgcctgcagccgtggcgccggcgctgagcagcgcactcaagcaactggtacgtgccggc
tgttcgatcggcgggctgtcggcaggggtttatccgcttgctcaattgggtctgctggac
ggctatcgcgctgcggtccactggcgctggcaggatgattttgccgagcgttttccgaag
gtcatcgccaccagccatctgttcgactgggaccgcgatcgtctcaccgcctgcggcggc
atgtcggtgctcgacctgctgctggcggtgctgtcccgcgatcatggcgccgaactggct
ggggcggtgtccgaagaactagtggtcgaacgcattcgcgaaggtggcgagcggcagcgc
attccattgcagaaccgtctgggctccagtcatccgaagctgacccaggcggtgctgttg
atggaagccaatatcgaagagccgttgaccactgatgaaatcgcccagcacgtgtgcgtg
tcgcgccgccagctggagcgcatcttcaagcaatacctcaatcgcgtgcccagccagtac
tacctggaactgcgcctgaacaaggcgcgccagatgctgatgcagaccagcaagtcgatc
attcagatcggcctctcctgcgggttttcatcggggccgcacttctccagtgcctatcgc
aatttctttggcgccacgccgcgtgaagatcgcaatcagcgccgcagcagcagcccgttc
gagctttcgccggtgcctgccgagcgcggctga
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