Pseudomonas coronafaciens pv. oryzae: POR16_08575
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Entry
POR16_08575 CDS
T08147
Name
(GenBank) helicase
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SNF2_assoc
SWIM
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGL56396
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Position
complement(1881873..1884629)
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AA seq
918 aa
AA seq
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MSSILEKVLAAAWTDLFHDRTLERGRDYARQKRIVLEDSSPQIIRTACRGSGLQIYTQTL
LFKDPDRYKNFLTCKCTCPVRNDCKHCVAAMLFLQDPENRPLLQAALSSHQREIEQQVEQ
QAVQRLKLPERLIDDLQPRPRLILASIEFSAYEPRNGRMQRHIQHRAALAFAYGKHYAVG
TTNVSILVSSLGSDLVNQKSDIIEHTETETLRIRRQGEKERQLRQELADLGFKVATRQSK
ALPDSAGDMYELPNDKAWLHFVLDDLPRLREQGWEIEIQEEFGFDVTPVEDWYAVIDEEN
ERDWFDLELGIIVNGERLSLLPILINLIRSHPELMSPTAVAKRGDEEQLLVQLNHFTQSG
GSPVQIALPYGRLKPVLATLGDFYWRQDGNNALRMSKADAARLTQLEDLPLTWQGGDRLR
HFAERLINIKDAPVSLPDGLNATLRPYQLEGLSWMQSLRELEVGGVLADDMGLGKTLQTL
AHLLMEKQAGRLDRPALAVMPTSLIPNWLDEAEHFTPDLKVLALYGANRHQDAGNLQDYD
LILTTYALLPRDLELLEKQPFHVLILDEAQYIKNPNSKAAQAARNLNARQRLCLSGTPLE
NHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDRLHHLNARIKPFLLRRTKEQV
ATELPPKTEIIHWVDLNDAQRDVYETVRLAMDKKVRDEITRKGVARSQIIILEALLKLRQ
VCCDLRLVNQDMPANSKQGTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQ
RGIAYALLTGSTRDRRTPIHDFQSGKLPIFLISLKAGGTGLNLTAADTVIHYDPWWNPAA
ENQATDRAYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGVLDGRTSGDWKLRDE
DLQALFAPLPAAPKKTRK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtccatccttgaaaaagtcctggccgcggcctggacagacttattccacgatcga
acgcttgagcgagggcgtgactatgcccggcaaaaacgcatcgtgctggaagactccagc
ccgcagatcatccgtactgcatgccggggctctggcctgcagatctatacccagaccctg
ctgttcaaagaccctgatcgctacaagaacttcctgacctgcaaatgcacctgcccggtt
cgcaacgactgcaaacattgcgtggcagcgatgctctttcttcaggacccggaaaaccgg
ccactgttacaggccgctctgagttcgcaccagcgggagatagagcaacaggtcgaacag
caggcagtgcaacgactcaaactgccggagcgcttgatcgatgacctgcaacctcgcccc
agactgatactggcgagcatcgagttcagtgcctacgagccacgtaacggccgcatgcag
cgacacatccagcatcgcgccgcactggcatttgcctacggcaagcactacgcggtcggc
accaccaacgtgagcattctggtcagttcgctgggcagtgatctggtcaaccagaaaagc
gacatcatcgaacacaccgaaaccgaaacgctgcgcatacgtcgccagggcgagaaggaa
cggcagctgcgtcaggaactcgccgatctgggcttcaaggtcgcaacccggcagagcaag
gcgttgcctgacagcgctggtgacatgtacgaactgcccaacgacaaggcatggctgcat
ttcgtactcgacgacctgccccggctgcgtgagcaaggctgggaaatcgagattcaggaa
gagttcggcttcgatgtcacgccagtggaagactggtacgcggtaatcgacgaagaaaac
gagcgcgactggttcgacctggaactgggcattatcgtcaacggcgagcgcctgagcctg
ctgccgatcctgatcaacctgattcgcagccatcccgaactgatgagccctaccgccgtg
gccaaacgcggcgacgaagaacaattgctggtgcagctcaaccatttcacccagagcggc
ggcagcccggtgcagatcgccctgccctacggccggctcaagccggtgctggcgacgctg
ggtgatttctactggcgtcaggacggcaacaacgcgctgcgcatgagcaaggccgatgct
gcacgcctgacccagcttgaagacctgccgctgacctggcagggcggcgaccgtctgcgc
cattttgccgagcgcctgatcaacatcaaggacgcaccggtcagcctgcccgatggcctg
aacgccacgttgcggccctatcagctggaaggtctcagctggatgcagtcgttgcgcgag
ctggaagtgggcggcgtactggcggatgacatgggcctgggcaaaacgctgcagaccctg
gcgcatctgttgatggagaaacaggccggacgcctcgaccgacctgcgctagcggtcatg
ccgaccagcctgatccccaactggctggacgaagccgagcactttacgccagacctcaag
gtgctggcgctgtatggtgccaatcgtcaccaggacgcaggcaacctgcaggattacgac
ctgattctgaccacctatgcgctgctgccaagggaccttgagctgcttgaaaagcagccc
ttccacgtgctgattctcgatgaagcgcagtacatcaagaaccccaatagcaaggctgcc
caggctgcacgcaacctcaatgcacgtcagcgcctgtgcctgagcggcacgccgctggaa
aaccacctgggcgagctgtggtcactgtttcacttcctcatgcccggctggctgggcaac
agcaaggaattcaacagcaactaccgaacggccattgaaaaacacggcaaccaggatcgc
ctgcatcacctcaatgcgcgcatcaagccgttcctgctgcgccgcaccaaagagcaggtg
gcgaccgagctgccacccaagaccgagatcattcactgggtagatcttaacgacgcacag
cgcgacgtatatgaaaccgtgcgtctggcgatggacaaaaaggtcagagacgagatcacc
cgcaagggcgtggcgcgcagccagatcatcattctcgaggcgctgctcaagctgcgtcag
gtgtgctgcgacctgcgactggtcaatcaggacatgccggccaacagcaagcaaggcacc
tcgggcaagctcaacagcctgatggagatgttcgaggaattgttggccgaaggtcgcaag
attctgctgttctcccagttcacctcgatgctcagcctgatcgaagaagagctgaaacag
cgcggcattgcctacgcattgctgaccggctcgacgcgtgaccgacgcacaccgattcac
gacttccagagcggcaagctgcccatcttcctgatcagcctgaaagccggcggtaccggc
ctcaacctgaccgccgccgacaccgtgatccattacgacccctggtggaacccggcagca
gaaaaccaggccactgaccgcgcttatcgcattggccaggacaagccggtattcgtttac
aaaatgatcgcgcgcggcaccgtggaagagaaaatccagcgcctgcaacgggaaaaatcg
gcactggcagccggcgtgctggacggccgaaccagcggcgactggaaactgcgcgacgaa
gacctgcaggcccttttcgcaccgctgcccgcagcgccgaaaaagacccgaaagtga
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