Pseudomonas coronafaciens pv. oryzae: POR16_09155
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Entry
POR16_09155 CDS
T08147
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00020
Citrate cycle (TCA cycle)
pcof00190
Oxidative phosphorylation
pcof00650
Butanoate metabolism
pcof00720
Other carbon fixation pathways
pcof01100
Metabolic pathways
pcof01110
Biosynthesis of secondary metabolites
pcof01120
Microbial metabolism in diverse environments
pcof01200
Carbon metabolism
Module
pcof_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcof_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcof_M00149
Succinate dehydrogenase, prokaryotes
pcof_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
POR16_09155
00650 Butanoate metabolism
POR16_09155
09102 Energy metabolism
00190 Oxidative phosphorylation
POR16_09155
00720 Other carbon fixation pathways
POR16_09155
Enzymes [BR:
pcof01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
POR16_09155
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
NurA
Motif
Other DBs
NCBI-ProteinID:
QGL56502
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All DBs
Position
2041248..2043020
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AA seq
590 aa
AA seq
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MANINALSFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKAGTVFLNEYYAVDLVKNQNGDF
VGIIAICIETGETSYIRAHATVLATGGAGRIYSSTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPDGDHVMLKLDHLGEEVLHSRLPGIMELSKTFAHVDPATAPIPVVPTCHYMMG
GVATNIHGQAITQDAAGVDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGIH
LEQALREGVEYARASQSDIDAALARLAGLNERTTGEDVATLRKELQSCMQNYFGVFRTGE
YMQKGIAQLADLRVRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAENRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattaatgcgctttcgttcgacgccatcatcatcggtggcggcggtgcaggc
atgcgcgctgcactgcaactggctcagggtggtcacaagactgccgtagtcaccaaggtc
ttcccgacccgttcgcacactgtttccgctcagggtggtatcacctgcgcaatcgcttcg
gccgatccgaacgatgactggcgctggcacatgtacgataccgtcaaaggctccgactac
atcggtgatcaggacgctatcgagtacatgtgttccgtaggtccggaagcggtcttcgag
ctcgagcacatgggcctgccgttctcccgtaccgagcagggccgcatctatcagcgcccg
ttcggcggtcagtccaaggacttcggcaaaggcggtcaggctgcccgtacctgtgctgcg
gccgaccgtaccggtcacgccctgctgcacaccctgtatcaggccaacctcaaggctggc
acagtattcctcaatgaatactacgcagtggatctggtgaaaaaccagaatggcgacttt
gtcggcatcatcgccatctgcatcgagacaggcgagacctcttacatccgtgcccacgct
accgtgctggcaactggcggtgcaggtcgcatctactcgtccaccactaatgccctgatc
aacaccggtgacggtatcggcatggcgcttcgcgctggcgtgccggtacaggacatcgaa
atgtggcagttccacccaaccggcatcgccggcgcaggtgtactggtcacagaaggttgc
cgcggtgaaggcggttacctgatcaacaagcacggcgagcgtttcatggagcgttatgcg
ccgaacgccaaggaccttgcaggtcgtgacgtggtcgcgcgttccatggtcaaggaaatc
atcgccggtaacggttgtggtcctgatggcgaccacgtgatgctcaagctcgatcacctg
ggcgaggaagtgctgcacagccgtctgccaggcatcatggagctgtccaagacctttgcc
cacgtcgaccctgcaactgctccgattcccgtggttccaacctgccattacatgatgggt
ggtgttgctaccaacattcatggtcaggcaatcactcaggatgcggctggcgtcgaccag
atcatcccgggcctgttcgccgtaggtgaagtggcttgcgtatccgtacacggcgcaaac
cgcctgggcggcaactcgctgctcgacctggtggtgttcggtcgtgctgcgggtatccac
ctggagcaggcgttgcgcgaaggcgttgaatacgcacgtgcttcgcagtccgacatcgat
gctgctctcgcgcgtcttgccggcctgaacgagcgtaccactggcgaagacgttgccacc
ctgcgtaaagagctgcagagctgcatgcagaactacttcggtgtgttccgtaccggcgaa
tacatgcagaagggtattgctcagctggctgacctgcgcgtgcgcatcgccaacgtcaag
atcaacgacaagagccaggcattcaacaccgcccgtatcgaagcgcttgaactgcaaaac
ctgctggaagttgccgaagctacggcgattgccgcagagaatcgtaaagagtcccgcggc
gctcacgcccgtgaagactttgaagatcgcgacgacgagaactggttgtgccacaccctg
tatttcccgggtgacaagcgtgtaaccaagcgtgccgtgaacttctcgccgaagactgtt
ccgacttttgagcccaagattcggacttattaa
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