KEGG   Pseudomonas coronafaciens pv. oryzae: POR16_09175
Entry
POR16_09175       CDS       T08147                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pcof  Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00010  Glycolysis / Gluconeogenesis
pcof00020  Citrate cycle (TCA cycle)
pcof00260  Glycine, serine and threonine metabolism
pcof00280  Valine, leucine and isoleucine degradation
pcof00310  Lysine degradation
pcof00380  Tryptophan metabolism
pcof00620  Pyruvate metabolism
pcof00630  Glyoxylate and dicarboxylate metabolism
pcof00640  Propanoate metabolism
pcof00670  One carbon pool by folate
pcof00785  Lipoic acid metabolism
pcof01100  Metabolic pathways
pcof01110  Biosynthesis of secondary metabolites
pcof01120  Microbial metabolism in diverse environments
pcof01200  Carbon metabolism
pcof01210  2-Oxocarboxylic acid metabolism
pcof01240  Biosynthesis of cofactors
Module
pcof_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pcof_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcof_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pcof_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pcof00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    POR16_09175 (lpdA)
   00020 Citrate cycle (TCA cycle)
    POR16_09175 (lpdA)
   00620 Pyruvate metabolism
    POR16_09175 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    POR16_09175 (lpdA)
   00640 Propanoate metabolism
    POR16_09175 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    POR16_09175 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    POR16_09175 (lpdA)
   00310 Lysine degradation
    POR16_09175 (lpdA)
   00380 Tryptophan metabolism
    POR16_09175 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    POR16_09175 (lpdA)
   00670 One carbon pool by folate
    POR16_09175 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcof04147]
    POR16_09175 (lpdA)
Enzymes [BR:pcof01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     POR16_09175 (lpdA)
Exosome [BR:pcof04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   POR16_09175 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 HI0933_like GIDA FAD_oxidored AlaDh_PNT_C DAO NAD_binding_8 3HCDH_N Thi4 2-Hacid_dh_C Amino_oxidase UDPG_MGDP_dh_N Lycopene_cycl
Other DBs
NCBI-ProteinID: QGL56506
LinkDB
Position
2048266..2049702
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFYEAKNGFAVHGISTSEVAIDVPAMIGRKSTIVKGLTGGVASLFKANGVTTLQG
HGKLLAGKKVELTAADGTVEIIEADHVILASGSRPIDIPPAPVDQKVIVDSTGALEFQQV
PQRLGVIGAGVIGLELGSVWARLGAQVTVLEALEKFIPAADEAVSKEALKTFTKQGLDIK
LGARVTGSKVNGEEVVVSYTDAAGEQSITFDRLIVAVGRRPVTTDLLASDSGVDLDERGF
IYVDDYCTTSVPGVYAIGDVVRGLMLAHKASEEGIMVVERIKGHKAQMNYNLVPSVIYTH
PEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTGGFVKIIADAKTDRVLGVHVI
GPSAAELVQQGAIAMEFGTSAEDIGMMVFSHPTLSEALHEAALAVNGGAIHIQNRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtcccagaaattcgacgtggtagtgattggcgcaggccctggcggctatgttgccgcc
atcaaggcagcgcaacttggtctcaagactgcctgcatcgagaaatatcaggacaaggag
ggcaaactggccctcggtggtacctgcctgaacgttggttgcattccatccaaggcgctg
ctcgacagttcctggaaattctacgaagccaagaatggcttcgcggtacacggcatttcc
acatccgaagtggccatcgacgtgccggccatgatcggtcgcaagtcgaccatcgtaaaa
ggcctgaccggcggcgttgccagcctgttcaaagccaacggtgtaaccaccctgcaaggt
catggcaaattgctggccggcaagaaagtcgaactgacagctgccgacggcactgttgaa
atcatcgaagcggaccacgtgatcctcgcttcgggctcgcgtcctatcgacattccgcca
gctccggttgaccagaaagtcatcgtcgattcgaccggcgcactggagtttcaacaggtt
ccgcagcgtctgggcgttatcggcgcgggcgtgatcggtctggaactgggttcggtctgg
gctcgcctcggcgctcaggtcactgtcctggaagcactggaaaagttcatccctgccgcc
gacgaagctgtttccaaggaagcactgaaaaccttcaccaagcagggtctggatatcaag
ttgggcgctcgcgtgaccggctccaaggtcaatggcgaagaagtggttgtcagctacacc
gacgccgcaggcgagcagtcgatcacctttgatcgtctgatcgtagcggtaggccgtcgc
cctgttaccaccgacttgctggcttcggacagcggcgtcgatctggacgaacgcggtttc
atctacgtcgatgactactgcaccaccagcgttcccggcgtttacgccatcggtgacgtg
gtacgtggcctgatgctggcccacaaggcttcggaagaaggcatcatggttgtcgagcgc
atcaagggccacaaggctcagatgaactacaacctggtcccatcggttatctacacccac
ccggaaatcgcctgggtcggcaagaccgaacagactctcaaggccgaaggcgttgaagtt
aatgtcggtacgttcccgttcgcagccagtggccgtgccatggctgccaacgacaccggt
ggcttcgtcaagatcattgccgacgccaagaccgatcgcgtattgggtgttcacgttatt
ggcccgagtgctgcagagctggtacagcaaggcgcaatcgctatggagttcggcaccagt
gcagaagatatcggcatgatggtcttctcgcacccgacgttgtccgaagcgctgcacgaa
gctgcactggctgtgaatggcggtgccatccatattcagaatcgcaagaaacgctaa

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