Pseudomonas coronafaciens pv. oryzae: POR16_09185
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Entry
POR16_09185 CDS
T08147
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00020
Citrate cycle (TCA cycle)
pcof00640
Propanoate metabolism
pcof00660
C5-Branched dibasic acid metabolism
pcof00720
Other carbon fixation pathways
pcof01100
Metabolic pathways
pcof01110
Biosynthesis of secondary metabolites
pcof01120
Microbial metabolism in diverse environments
pcof01200
Carbon metabolism
Module
pcof_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcof_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
POR16_09185 (sucD)
00640 Propanoate metabolism
POR16_09185 (sucD)
00660 C5-Branched dibasic acid metabolism
POR16_09185 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
POR16_09185 (sucD)
Enzymes [BR:
pcof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
POR16_09185 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QGL56508
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All DBs
Position
2051077..2051958
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AA seq
293 aa
AA seq
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MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLNLPVFNTVKEA
VDTTGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTIDMLEAKVKCDELGVVLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAYIKAHVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWPTK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagacaccaaggttatctgccagggtttcactggttcgcaa
ggtactttccactccgaacaagccattgcctacggcaccaaaatggtcggcggcgtgact
ccaggcaaaggcggcactacgcacctgaacctgccagtgttcaacactgtgaaagaagcg
gtagacaccactggcgcaactgccagcgttatctacgttccagctcctttctgcaaggat
tccatccttgaagcagcgttcggcggcatcaagctgatcgtctgcatcaccgaaggcatc
ccgaccatcgacatgctcgaagccaaggtcaagtgtgacgaactgggtgtggtcctgatc
ggtccaaactgcccaggcgtcatcactccaggcgagtgcaagattggcatcatgccaggt
cacatccacttgccaggcaaagtaggcatcgtgtcgcgttccggcaccctgacttacgaa
gctgtgaagcagaccactgacgccggtttcggtcagtccacctgcgtcggcatcggtggt
gacccgatcccgggttcgaacttcatcgacatcctgaagctgttccaggaagacccgcag
accgaagcgatcgtcatgatcggcgagatcggcggttcggctgaagaagaagcggctgcc
tacatcaaggctcacgtgaccaagccggttgtttcctacatcgctggtgtgactgctcct
ccgggcaagcgcatgggccatgccggtgcaatcatctccggtggcaaaggtactgcagac
gagaaattcgctgcactgcaggacgctggtgtgaaaaccgtgcgctccctggcagacatc
ggcaaggccctggccgagctgactggttggccgaccaagtaa
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