Pseudomonas coronafaciens pv. oryzae: POR16_09470
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Entry
POR16_09470 CDS
T08147
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcof01002
]
POR16_09470
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
POR16_09470
Peptidases and inhibitors [BR:
pcof01002
]
Cysteine peptidases
Family C82
POR16_09470
Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
POR16_09470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
QGL56562
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All DBs
Position
2125834..2126799
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AA seq
321 aa
AA seq
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MLSRIPAVTRCLSLAALCAVSSVHALEFPLPPPGEDIVGQVQVIKAKYEDTFADLGTKYD
LGYLEMIAANPGVDPWLPGAGKDIVLPTRFILPPGPREGIVINLAEYRMYYYPKGQNVVH
TYPLGVGREGWGSPIGVTKVIAKTPNPTWTPPASIKAEHAADGDPLPDVVPAGPDNPLGP
FKFGLGMSGYLIHGSNKKFGIGMRTSHGCFRMYNNNVLELADMAPVGTTVRIISEPYKFG
LSGGKVYLEAHTPVDDQGNPSVVDKHTAVINALLKRDDLGNNLRMNWDLVRDVVAAEDGM
PVEIAEPGKAPSSAEEPVIFQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcattccagccgttacccgctgtctgtcacttgctgctctgtgcgcggtg
agctctgtccatgctctggagttcccgttgccgccgcctggcgaggacatcgtgggccag
gtgcaggtcatcaaggccaaatacgaagataccttcgccgatctgggcacgaaatatgat
ctgggctatctggaaatgatcgccgccaaccctggcgtcgatccgtggttgccaggcgcg
ggcaaggacatcgtgctgccgacccgtttcatcctgccaccgggcccgcgtgaagggatc
gtgatcaacctggccgagtaccgcatgtattactaccccaaggggcagaatgtggtgcac
acctatccactcggggtagggcgtgaaggctggggctcgcctatcggtgtgaccaaggtc
attgccaagacgccgaaccctacctggacgccgcctgcatcgatcaaggccgaacatgcc
gctgacggcgatccgctgccagacgtcgtgcccgccggtccggacaacccgcttgggcca
ttcaagttcggcctggggatgtccggctatctgattcacggctcgaacaagaagtttggc
attggcatgcgcaccagccatggctgcttccgcatgtacaataacaacgtgcttgaactg
gctgacatggcccctgtcggcaccactgtgcgcatcatcagcgagccttacaaattcggc
ctcagtggcggcaaggtttaccttgaggcgcacacgccggtcgatgaccagggtaacccg
tcagtggtcgacaaacacacggcggtcatcaatgcgctgctcaaacgtgacgatctgggc
aacaacctgcgcatgaactgggatctggtgcgtgatgtggtggccgctgaagatggcatg
ccggtggaaatcgcagaaccgggtaaagcgccttcgagtgctgaagagccggtaattttt
cagtaa
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