Pseudomonas coronafaciens pv. oryzae: POR16_10430
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Entry
POR16_10430 CDS
T08147
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02020
Two-component system
pcof02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
POR16_10430
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
POR16_10430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcof02035
]
POR16_10430
Bacterial motility proteins [BR:
pcof02035
]
Flagellar system
Chemotaxis proteins
MCPs
POR16_10430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
CHASE3
HAMP
MG280
DUF7088
HVO_0513_N
4HB_MCP_1
DUF7121
Laminin_II
DUF948
Motif
Other DBs
NCBI-ProteinID:
QGL56736
LinkDB
All DBs
Position
2297722..2299344
Genome browser
AA seq
540 aa
AA seq
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MFSKLSISQKLYFSFVAIVILIAVLVASAYRGFEQVEDATNNNVHTYQVLSDAQLALEQL
INIETGMRGFVIASKDTFLEPLVAGQRRFAEELDSLKRLTSDNAEQQRRLATLGETQKRW
MDEDINPIIALRRDLTARNMPDDELDARITSGADKAKMDGMRAILSEISAVENKLLVVRT
QDMVDAKHLAIMILMCGGLAAAVLAGILATLLGRSTTARLQLAIDAATAIANGKLDTVID
TSSHDELPKAFDRMQNRLREMIHQISQAANQLVVAVQQISGASEQLSGAIQEQSTSASMM
AATIEELTVSIHHVSENADEAHQLASRSGQQSKDGAQVIESTLSSMNGIAKTVQLSSTQV
AGLGQHSEHISSIISVIQGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQNTG
KSTKEIAGMIEKIQAGVRETVESMRSGVQEVNQGVEMAGTAGQAIIEIRDSSSKVLQVVD
QISFALREQTVASQDVARNVERSAQMAEQNNMSVQELLKTSGGLKSLATSLQAEVGKFKL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaactcagtatctcgcaaaagctctatttcagttttgtcgcgatagtcata
cttattgccgtgctggtagccagtgcttacagaggcttcgagcaggtagaagacgccacc
aacaacaacgtccacacttatcaagtgctgagcgacgcacagttggctcttgagcaactg
atcaacatcgagacaggcatgcgaggcttcgtcatcgcgtcgaaagacacatttctcgag
ccgttggtagcgggtcagcggcgctttgctgaagaacttgattcgctcaagcgcctgaca
tctgataatgccgaacaacagcgtcgtctggccactctgggggagacccagaagcgctgg
atggatgaggacatcaacccgatcatcgccctgcgtcgtgacctgaccgcacgcaatatg
ccggatgacgaactggatgcgcgcattacctccggtgccgacaaagccaagatggacggc
atgcgcgctattctgagcgaaatcagcgctgtcgaaaacaagctgctggtggtaagaacc
caagacatggtggacgccaaacatctcgccatcatgatcctcatgtgtggcggccttgca
gcggctgtcctagcgggaatcctggctactttattgggtcgcagcactaccgcacgcctg
cagctggctattgatgctgcaactgccattgccaatggcaaactcgacaccgtgatcgat
accagcagccatgacgaactgccgaaagcctttgaccgcatgcagaatcgcttgcgcgaa
atgattcatcagatcagccaggcagccaatcagttggtagttgccgtgcaacagatttcc
ggcgcatccgagcaactttccggcgcaattcaggaacagtcgacgtccgcctcaatgatg
gcggctaccatcgaagaactgactgtcagcatccaccacgtttccgaaaacgccgacgag
gcccaccagctcgccagtcgttcgggccagcagtccaaagatggtgcgcaggtcatcgag
agtacgctgtccagcatgaacggcatcgccaagaccgtgcagctttcgtctactcaggtt
gcaggcctgggtcagcattccgagcatatctcgtcgatcatcagtgtgattcaaggtatt
gccgaccagaccaacctgttggcgctcaacgctgccatcgaagccgcacgtgccggcgag
cagggtcgcggcttcgcggttgttgccgacgaagtccgcctgctggcgcaaaacactggc
aagtccaccaaggaaatcgccggcatgatcgagaagatccaggcgggcgtacgtgaaaca
gtcgaaagcatgcgcagcggtgttcaagaagttaaccagggcgtcgaaatggctggcacg
gctggtcaagccatcatcgaaatccgcgacagctcgagcaaggttctacaagtggtcgat
cagatatcgttcgcattgcgcgagcagacggtcgccagtcaggatgtagcgcgcaacgtc
gagcgttctgcgcagatggccgagcagaacaacatgtcggtgcaggaactgctcaaaacc
agcggtggcctgaagagccttgccaccagcttgcaggcggaagtgggtaaattcaaactg
taa
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integrated database retrieval system
