Pseudomonas coronafaciens pv. oryzae: POR16_10730
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Entry
POR16_10730 CDS
T08147
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18296
multidrug efflux pump
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Module
pcof_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcof02000
]
POR16_10730
01504 Antimicrobial resistance genes [BR:
pcof01504
]
POR16_10730
Transporters [BR:
pcof02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
POR16_10730
Antimicrobial resistance genes [BR:
pcof01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
POR16_10730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QGL56794
LinkDB
All DBs
Position
complement(2361433..2364573)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSLFFIRRPNLSWVLALFILLAGLMALPALPVAQYPDVAPPQITITATYPGASAKVLTDS
VTSVIEDELNGAKGMLYYESTSNSTGSAEINVTFVPGTNPDLAQVEVQNRIKKAEARLPQ
TVLSQGLQVEQASSGFLLIFTLNYTGDSANKDTVALADYAARNVNNEISRVNGVGRLQFF
AAEAAMRVWIDPQKLVGFGLSIDDVNTAIRAQNVQVPAGSFGSSPGTSLQELTATLAVKG
TLDNPEEFGRIVLRANEDGSAVHLSDVARVAIGSQDYSFESRLNGKRAVAGAVQLSPGAN
AIGTARAVKQRLTELSANFPEGVEFSIPYDTSSFVDVAIDKVIYTLIEAMVLVFLVMYLF
LQNIRYTLIPTIVVPVCLAGTLAIMYLLGFSVNMMTMFGMVLAIGILVDDAIVVVENVER
IMAEEGLSPAAATVKAMQQVSGAIFGITLVLAAVFLPLAFMGGSVGVIYQQFSLSLAVSI
LFSGFLALTFTPALCATLLKPIPAGHHEKRGFFGGFNRLFGKFTHRYERVSSSMIKRAGR
YMLLYVGIVGLLGFFYLRLPESFVPVEDQGYLIIDVQLPPAATRARTDVTAQLLENYMLS
REATSAVTMLLGFSFSGMGENAGLAFPTLKDWSERGTGQSAAEEAAAFNQHFAGLGDGTV
MAVTPPPIDGLGTSGGFALRLQDRAGLGREALLAARNELLGKANGNPKILYAMMEGLAEA
PQLRLNIDREKARALGVSFESISNALSTAFGSSVISDFANAGRQQRVVVQADQNARMTPE
SVLKLYVPNSSGTLVPLGAFVSTHWEEGPVQIARYNGYPAFRIAGDAPPGVSTGEAMAEI
EHILSSLPAGIGYEWTGLSYQEKVASGQATGLFALALLVVFLLLVALYESWAIPLVVMLI
VPVGALGSVLAVTAVGMPNDVYFKVGLITIIGLAAKNAILIVEFAKELWDQGHSLRDAAL
QAARMRFRPIVMTSLAFILGVVPLTLATGAGAASQRAIGTGVIGGMLSATLLGVVLVPVF
FVWVLSALRRKPHQQHQTADVEPDER
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttctttatcaggcggcccaatctttcctgggtgctggccttgttcatttta
ctggccggactgatggcgctgcctgccttgccggtggcgcagtacccggatgtagctccg
ccgcagatcaccatcaccgccacctatcccggcgcctctgccaaagtgctgaccgattcg
gtgaccagtgtcatcgaggacgagctcaacggtgccaagggcatgctctattacgagtcg
accagcaactcgaccggcagcgccgaaatcaatgtcacgttcgtacccggtaccaatccg
gacctggcgcaggtagaagtccagaaccgtatcaagaaagccgaagcgcgcttgccgcag
actgttctcagtcaagggctgcaagtcgaacaggccagctccggctttctgctgatcttc
accctgaactacacaggtgactcggccaacaaggacacggtcgctctggctgactacgca
gcacgtaacgtcaacaatgaaatcagtcgggtgaacggtgtcggcaggctgcagttcttc
gccgcagaagccgccatgcgagtctggatcgacccgcagaagctggtcggcttcggtttg
tccatcgatgacgtgaacacggcaattcgcgcgcagaacgtgcaagtgccggctggcagt
ttcggcagcagcccaggcacgtcattacaagagttgaccgctacgctggcggtcaagggc
acgctggacaacccggaagagttcggacgaattgtgctgcgtgccaacgaagatggctct
gcggtgcatctgtcagacgtcgcacgggtcgcgatcggcagtcaggattacagtttcgaa
tcacgtctgaacggcaagcgcgccgtggccggggccgtccagctttcgccaggcgccaat
gccatcggcactgccagggcggtcaagcagcggctgaccgagctgtcggccaacttcccc
gagggggtcgagttttcgataccgtatgacacctcaagctttgtcgatgtggccatcgac
aaagtgatctacaccctgattgaagccatggtgctggtgtttctggtgatgtacctgttt
ttgcagaacatccgctacacgctgatcccgaccatcgtggtaccggtgtgtctcgcaggt
acgctggcaatcatgtacttgctgggcttttcggtgaacatgatgacgatgttcggcatg
gtgctggctatcggtattctggtcgacgatgccatcgtggtggtcgaaaacgtcgagcga
atcatggccgaggaaggcttgtcccccgctgcggcgaccgtaaaggcgatgcaacaggtc
tccggcgcgattttcggcatcactctggtactggctgcagtgtttctgccgctggcgttc
atgggcggttcggtcggtgtgatttaccagcagttttcgctgtcgctggccgtgtcgatt
ctgttttcggggtttctggcccttactttcactccggcgctgtgcgccacgctgctcaag
ccgatccctgccgggcaccatgaaaagcgtggcttctttggaggcttcaatcgtctgttc
ggcaagttcacccaccggtacgagcgtgtcagttccagcatgatcaagcgtgccggccgc
tacatgttgttgtatgtcgggatcgtcggcctgctgggttttttctacctgcggttgcca
gagtccttcgtgccggtggaagaccagggctatctgatcatcgacgtgcaactaccgcct
gccgcgaccagggcgcggaccgatgtcacggctcagttgctggaaaactacatgctgtcg
cgtgaagccaccagcgcggtgaccatgctgctggggttcagcttctccggcatgggcgag
aatgccggcctggcatttccgaccctcaaagactggtcggaacgtggcaccggccagtcg
gcggcggaagaagcggctgcgttcaatcaacattttgccggcctcggcgacggtacggta
atggccgtcacgccgccccctatcgacggcctcggcacttcgggcgggttcgcgttgcgc
ttgcaggatcgtgcaggtctgggccgcgaagctctgctggcggcgcgcaacgaactgctg
ggcaaggccaatggcaacccgaagattctctacgcgatgatggaaggtctggctgaagcg
ccgcagttgcgcttgaacatcgaccgcgaaaaggcccgcgcccttggggtcagcttcgaa
tcgatcagcaacgccctctccaccgcattcggttcctcggtgatcagcgattttgccaac
gctgggcggcaacagcgagtagtcgtgcaggccgaccaaaacgcgcgaatgaccccggaa
agcgtgcttaaactgtatgtacccaacagcagcggcacgctggtgccactgggtgcgttc
gtgtctacacactgggaagaaggcccggtacagattgctcgctacaacggctacccggcg
ttccggatagccggtgatgcaccgcccggcgtgagcaccggcgaagcgatggcggaaatc
gagcacatcctctccagcttgcctgcgggtataggttatgaatggacaggtctgtcgtat
caggaaaaagtcgccagcgggcaagcgaccgggctgtttgcacttgcgctgctggtggta
tttttgctgctggtcgcgctttacgagagctgggcgattccgctggtagtgatgctgatc
gtgccggtgggcgcgctggggtcggtcttggctgtgactgccgtaggcatgcccaatgat
gtctatttcaaggtcgggctgatcacaatcatcgggctggcggcaaaaaacgcgattctc
atcgtggagttcgccaaagagctttgggatcagggccactcactgcgcgatgctgccctt
caagcggcgcggatgcgctttaggccgattgtcatgacttcgctggccttcatcctcggc
gttgtcccgcttaccctggctaccggcgcaggtgctgcgagccagcgtgccatcggcact
ggcgtcatcggcggcatgcttagcgctacgttactgggggtggttctggtgccggttttc
ttcgtctgggtactgtcggcgctgcgccgcaagccgcatcaacaacaccagactgctgac
gtcgagcccgacgaaaggtaa
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