Pseudomonas coronafaciens pv. oryzae: POR16_10740
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Entry
POR16_10740 CDS
T08147
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Module
pcof_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcof03000
]
POR16_10740
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pcof01504
]
POR16_10740
Transcription factors [BR:
pcof03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
POR16_10740
Antimicrobial resistance genes [BR:
pcof01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
POR16_10740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
HTH_6
TetR_N
HTH_Tnp_ISL3
Xre-like-HTH
HTH_IclR
TetR_C_29
HTH_26
HTH_31
HTH_29
HTH_3
DUF134
DUF6066
LZ_Tnp_IS481
Motif
Other DBs
NCBI-ProteinID:
QGL56796
LinkDB
All DBs
Position
2365947..2366504
Genome browser
AA seq
185 aa
AA seq
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MELPAADDKFLKALAVALVDHSNGTLKDIAQAAGVSKATLNRFCGTRANLVEMLLNHASV
LMNQMVADADLKHAPPLEAFQRLVDNHLMHREMLVFLVFQWRPDSLDESCGGRRWLPYSD
ALDAFFLRGQREGLFRIDISATVLSEMFAALLSGMVDAERRGRLARAGMGALLIQFFLQG
AAAVR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggaattacccgctgctgacgacaaatttctgaaggccctggccgttgcgctggttgac
cattccaacggtacgctcaaggacattgcgcaggctgctggcgtaagcaaggcgaccctc
aaccggttctgcgggacccgggccaatctcgtggaaatgctcctcaaccatgcctcggtc
ctcatgaatcagatggtagccgacgcagacctgaagcacgcgccgccgctcgaggctttc
cagcggctggtggacaaccaccttatgcatcgcgaaatgctggtctttctggtcttccag
tggcgccctgattcgctcgacgaaagctgcggcggtcgtcgctggttgccttactccgat
gcacttgatgcgttctttctgcgtggtcagcgtgaaggcctgttcaggatcgatatcagc
gccactgttctcagcgaaatgtttgcagcgctgctctccgggatggtcgacgccgaacgc
cgcggtcgtctggcgcgcgcagggatgggagcgctgctgattcagtttttcctgcagggc
gcggcggccgtcaggtaa
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