Pseudomonas coronafaciens pv. oryzae: POR16_10875
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Entry
POR16_10875 CDS
T08147
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00550
Peptidoglycan biosynthesis
pcof01100
Metabolic pathways
pcof01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
POR16_10875 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
POR16_10875 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
POR16_10875 (mrdA)
Enzymes [BR:
pcof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
POR16_10875 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcof01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
POR16_10875 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MAP
Motif
Other DBs
NCBI-ProteinID:
QGL56821
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All DBs
Position
2392256..2394145
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AA seq
629 aa
AA seq
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MPNPIPLKDHEKETRLVNQRLIACAVLVGLLATCLVARMYFLQVTEFEYHSTISENNRVH
VLPIPPERGLIFDRNGEVLADNRPSFNLTLTRERAGDWHKVIDELMTLLELPDEDRILFD
KELKQVRHPFEPATLLYELTEEQIATLAVNQYLLPGVDVAAQFVRHYPLGAHFAHSIGYV
GRINEKEAAHLDNEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTDP
VPGKNITLTLDAHLQAAAEDALGDRRGSVVALDPETGEVLAMVSKPSFDPNLFVTGISFK
QYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVVTASTKVFDPGYFQLPDFD
HKYRNWNHSGDGWVDMDTAIMRSNDTYFYTLAHKLGIDRLHDYMTMFGIGQKVSLDMFEE
AAGLMPSREWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATSLIASKGVWHRPHLA
MEVGNAAPVDEHPMPNIVLHDPNEWNQVNTGMQMVMHDPRGIARDAAKGAQYRIAGKSGT
AQVVAIKQGERYNRLKTLERNRDNALFVGFAPADHPKIVVSVTIENGEAGGRVAGPVVRE
ILDAWLLDSDGKLKPQYAVPTKATGNPHA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatccaatccccctgaaagaccacgagaaagagacgcggctggtcaaccagcga
ctgattgcctgtgccgtgctggtcgggctgctggccacctgcctggtggcgagaatgtac
ttcctgcaggtcaccgagttcgagtatcactcgacgatctccgaaaacaaccgcgtccat
gtactgccgattccgcctgagcgcggtttgatctttgaccgtaatggcgaagtgctggcc
gacaatcggcccagtttcaatctgaccctgacccgtgagcgagcaggtgactggcacaag
gttatcgacgaactgatgaccctgctggaactgccggatgaagaccgtattctgttcgac
aaagagctgaaacaggtacgtcatccattcgagcctgcgaccctcctgtacgaactgacc
gaagagcagatcgccacattggcagtcaatcagtacctgttgccgggcgttgatgtcgcg
gcacagttcgttcgtcactacccgctgggcgcacattttgctcactctatcggttacgtt
gggcgcatcaacgaaaaggaagcggctcacctcgacaacgagtatcgcggcactcaatcc
atcggcaaaaccgggatagagcgcttctacgagtcagagctgcacggtcatgtgggttac
gaagaagtcgagaccaatgcccaggggcgcgtactgcgggttctgaaacacactgacccg
gtgcccggcaagaacatcaccctgacgctggatgcgcatcttcaggctgctgcggaggac
gcgctgggtgatcgtcgtggttcggtagtggcgctggacccggaaacaggcgaggtgctg
gcgatggtcagcaagccgagcttcgaccccaatctgttcgtgaccggcatcagcttcaag
caatacgctgcattgcgcgattccatcgaccggccgctgttcaatcgcgtgttgcgcggt
ctgtatgcccctggctcgacggtcaagccggaagttgccattgccggcctcgacagcggt
gtggtcactgcctcgaccaaggtcttcgaccctgggtacttccaactgccggacttcgat
cacaagtaccgcaactggaaccatagcggtgatggctgggtagacatggacaccgcgatc
atgcggtccaacgacacgtacttctataccttggcgcacaagctgggcatcgaccgactg
catgactacatgaccatgttcggcattggccagaaagtctcgctggacatgttcgaggag
gccgccgggctgatgccgtcccgcgaatggaagcgtgcaacgcgccgtcaggcctggttc
cccggcgagacagtaatcctcggtataggtcagggctacatgcaggtcacgccattgcaa
ctcgcccaggccacttcgctgatcgccagcaagggcgtctggcatcgtccgcatctggcg
atggaagtcggcaatgccgcgccggtcgatgagcatcccatgcccaatatcgtgctgcat
gaccccaatgagtggaatcaggtcaacaccggcatgcagatggtgatgcacgatccgcgc
ggtattgcccgcgacgccgcaaagggcgcgcagtaccggattgccggcaagagcggtacg
gcgcaggtggtggcgatcaagcagggtgaacgttacaaccgtctcaagacccttgagcgt
aaccgcgacaacgccttgttcgtcggtttcgccccggctgaccatccgaagatcgtagtg
tcggtgaccatcgagaacggcgaggcgggtggtcgggtggccggtccggtggtgcgggaa
attctcgacgcctggctgctcgacagcgacggcaagctcaagccgcaatacgcagtgccc
accaaggcgacgggcaacccgcacgcctga
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