Pseudomonas coronafaciens pv. oryzae: POR16_10920
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Entry
POR16_10920 CDS
T08147
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
POR16_10920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcof02000
]
POR16_10920
Transporters [BR:
pcof02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
POR16_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
DUF1846
Motif
Other DBs
NCBI-ProteinID:
QGL56830
LinkDB
All DBs
Position
complement(2403619..2404671)
Genome browser
AA seq
350 aa
AA seq
DB search
MKFIKHLAPSGLSSLTLAVALFSMPAQAETTLYLGMNGGTMERLYADQVLPAFEKANNVK
VVIVPGTSADILAKVQASKDNPQMHVIFLDDGIMYRAISMGLCDTLQPSASLADLPAKAK
IKDQAAAVSLGVTGLAYNTRMFKENGWSAPTSWMDLADKRFKDKVVFQSLASSTFGLHGF
LMFNRIQGGSEKDVEPGFKAWPKTVGPNVLEYIASSAKISEMVQTDEAALFPLTPTQVTA
LKIKGVPVEYASPKEGGVVLNVAECAIANNNQPELAQKLAAYLLTPEAQAPALEFGDQIP
SNPKTPTTDKTRGQVEAMNKYLETAVTIDWDQVNQIRPEWNARWSRSIER
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcaaacatcttgcccccagcggtctgtcgagcctgaccttggccgtcgca
ctgttttccatgcctgcgcaggctgagacgacgctgtatctgggcatgaacggcggcacc
atggagcgcctgtatgccgatcaggtactgcccgcgttcgagaaggccaataacgtaaag
gtcgtgatcgtgccgggtacctcagccgatatcctcgccaaggtgcaggccagcaaggac
aacccgcagatgcacgtgatctttcttgacgacggcatcatgtaccgggccatttccatg
ggtttgtgcgacaccttgcagccgagcgccagcctcgccgacctgccagccaaggcaaaa
atcaaggatcaggccgcggcagtcagcctgggcgtgacaggcctggcctacaacacacgc
atgttcaaggaaaacggctggagtgcgccgacctcgtggatggatctggccgacaaacgc
ttcaaggacaaggtcgtgttccagtcgctggcttcctcgaccttcgggctgcatggtttt
ctgatgttcaaccgcattcagggcggcagtgaaaaagacgtcgagcctggcttcaaggcg
tggccgaaaacagtcggcccgaatgtgctggaatatattgccagctcggcgaaaatctca
gaaatggtgcagaccgatgaagccgcactgtttccattgaccccgactcaggtcaccgcg
ttgaagatcaaaggcgtgccagtggagtacgcatcgcccaaggaaggcggcgtcgtgctg
aatgtggccgaatgtgccatcgccaacaacaaccagccggaactggcgcagaaactggca
gcgtatctgctcacccccgaggctcaggcgccggcactggagttcggtgaccagatcccg
tcgaaccccaagacccccaccaccgacaagactcgaggccaggtcgaggccatgaacaaa
tacctcgaaaccgctgtgaccatcgactgggatcaggtcaatcagatccgtcccgagtgg
aacgcccgctggagccgtagtatcgagcgctag
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