Pseudomonas coronafaciens pv. oryzae: POR16_11055
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Entry
POR16_11055 CDS
T08147
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02025
Biofilm formation - Pseudomonas aeruginosa
pcof03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
POR16_11055 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
POR16_11055 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcof02044
]
POR16_11055 (tssH)
Secretion system [BR:
pcof02044
]
Type VI secretion system
Imp/Vas secretion system core components
POR16_11055 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
AAA_16
ClpB_D2-small
nSTAND3
NACHT
TniB
Sigma54_activat
AAA_7
AAA_25
AAA_29
Clp_N
T2SSE
AAA_18
AAA_24
NBD_SMAX1
SLFN-g3_helicase
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
QGL56854
LinkDB
All DBs
Position
2429551..2432154
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AA seq
867 aa
AA seq
DB search
MINPDLQQLVQALDVPTRIELEGTAERCVSRGSNRILVEDLLIALVERPDGMLVRALNDA
SIAAADFASLLLPPAEYCGASNPVFAAELVLWLQDALLVSNLDLGQSQIDQAALILALLR
NPLRYADRPYQPLLAKINIERFRDFALAEQASGTSRTTASPSESLLERFTHNLTQQARRG
ELDPVLCRDDCLRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIVAGQVPDLLKNV
ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKSSPIPVILFIDEAHTLIGAGSQAGGSDA
ANLLKPALARGELRTIAATTWTEYRQYFEKDPALARRFQPVRVLEPTLEQAIIILRGLAP
LYERSHGVYLRDDAVVAAARLSARYISGRQLPDKAIDLLDTACARVRVSLVAVPERIERL
RADRTQYQRHYDAVQRDAAAGLLVDEKVLNTLASDLSRIQQELPALEVMWADQQSAARRL
LDLRSHQAHPAVKREGPGNPNSKCRSTEAQESDLVQARQTLMDTQADDRLVSFEVCPRLI
AEVVNAWTGIPLSQLAQAHSSEITGLSSALRLRIRGQEPAIQVLEQSVRVSAAGLSALNA
PSGVFLLTGPSGVGKTETALALADLLYGGDRFLITINMSEFQEKHTVSRLIGAPPGYVGY
GEGGMLTDAVRQKPYSVILLDEVDKADPDVLNLFYQIFDKGVANDGEGREIDFRNTLILM
TSNLGGDLIHSLCRDGRRPESDTLVRAINPVLVGHFKPALLARMRVVPFYPISGLVLQEL
IELKLDHLVEKLEGRGLTFSYSEELVFHLLENCAQLDSGARLIDHVLASQLTPLIADALL
LASNSDAMLLTVHATLDSSGGIVCECK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacccagacctgcagcaactcgttcaagctcttgacgtgcccactcgcatagag
cttgaggggacagccgagcgttgcgtttcccggggcagcaacagaattcttgtcgaagat
ctactgattgccctggtggagcgtcctgacggcatgctagtacgtgctttgaatgacgcc
agtatagcggctgccgatttcgcaagcctcttgctcccgccagctgaatactgtggggct
tccaacccggtatttgctgccgaacttgttctgtggcttcaggacgccttgttggtttcc
aatctggatttggggcagagccagattgatcaggctgcacttattctcgctttgctgcgt
aaccctttgcgttatgccgatcgcccctatcagccgctgctggcaaaaatcaacatcgag
cgatttcgtgacttcgcccttgcagagcaggcatccggaacatcccgaactacagcgagc
ccaagcgagtcgcttcttgagcgcttcactcataacctgacgcaacaggccaggaggggt
gagctggatccggtactgtgccgtgacgactgtttgcgtcagatggtcgacatactggct
cgtcggcgcaagaacaacccgattgtggtaggcgaggccggggttggcaaaactgcgatt
gttgaagggttggcgctgagaatcgtcgcaggacaggtccctgatctcttgaagaacgtc
gagcttttatctctggatatgggattgcttcaggcaggcgccagcatcaagggtgagttt
gaacgtcgcttgaagggagtcatcgatgaggtcaagtcttcgccgatacctgtcattctt
ttcattgacgaggctcatacgctgatcggggccggttcgcaggcgggaggttcggacgca
gccaatctgttgaaaccggcactggctcgcggcgaattgcgcaccattgcagcgactacc
tggaccgagtacaggcaatacttcgagaaagaccctgcgcttgcgcggcgttttcagcct
gtgcgagtactggaaccaacgttggagcaggccatcatcattttgcgtgggctcgccccg
ctatatgagcgcagccatggcgtctatctgcgcgatgacgctgtggttgccgctgctcga
ctatcggcacgttatatttcggggcgacaactgcctgacaaggcaatcgatctgctcgat
acggcctgtgctcgcgtgcgagtcagtctggttgccgtgcccgaacgcatcgagcgtctg
cgagcagatcggactcaataccagaggcattatgacgcagtgcagcgtgacgcagctgcg
gggcttcttgtggatgaaaaagtgttgaatacactggcatcggatctttcacgcattcag
caagagttgcccgcactggaagtcatgtgggctgatcaacagagcgccgctcggcggctg
ctcgatctacgcagccatcaggcacaccctgcagtaaagcgcgaaggcccgggtaaccca
aacagtaaatgtcgttccacagaggcacaggaatccgatttggttcaggcccggcaaacg
ctcatggatactcaagctgatgaccgtcttgtcagttttgaagtgtgtccgaggctgata
gcggaagtggtcaatgcctggacaggcattccgttgtcgcagctggcgcaagcgcacagt
tcggaaattaccggcctctcttctgcgttgcgtctgcgcattcgtgggcaggagccggcg
attcaggtacttgaacaatccgtaagagtatctgccgccggattgagtgcgctcaatgca
ccgtcgggagtattcctgttgacgggccccagcggagtaggcaagaccgaaacagccctc
gctcttgctgacctgctgtacggcggtgaccgttttcttatcacgatcaacatgtccgag
tttcaggaaaagcacacggtctcgcgcttgatcggagcgccacctggttatgtcggttat
ggggaagggggcatgctgactgatgccgtgcgacagaaaccttactcggtaattttactt
gatgaggtggataaagctgatcccgatgtattgaacctgttctatcagattttcgataaa
ggcgtagcgaacgatggcgaggggcgagaaatagacttccgtaatacgcttattctgatg
acctccaaccttggcggcgaccttatacattcactctgccgagacggcagaaggccggaa
agcgatacgctggtgcgtgcgataaacccggtgctagtgggtcacttcaaacccgcattg
ctcgccagaatgcgcgtggttcctttctatcccatcagtggcctggtgcttcaagagctg
attgaattaaagctggatcatcttgtggagaagcttgaaggacgcggactgacgttcagc
tattccgaggaactggtttttcatctgcttgaaaactgcgcgcaactcgacagcggtgcc
aggctgattgaccacgtactggcgtcgcaactgaccccgctcatcgcggacgctttgctt
cttgcgagcaacagcgacgctatgcttctcacggttcacgctacgctggacagttcgggc
ggcattgtctgtgagtgcaaataa
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