Pseudomonas coronafaciens pv. oryzae: POR16_11075
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Entry
POR16_11075 CDS
T08147
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
POR16_11075 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcof02044
]
POR16_11075 (tssK)
Secretion system [BR:
pcof02044
]
Type VI secretion system
Imp/Vas secretion system core components
POR16_11075 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QGL56856
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Position
2435189..2436520
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AA seq
443 aa
AA seq
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MNSHKVIWQEGMLLRPQHFQHNDRYYDHQLRVRTRLAGPYNWGFTAVEIDPQFLGSGQIV
LAHASGILPDGSVFDIRDHDTPLVLDIPANTSNMAVYIALPIVAGNCVEARGHEQPDAVT
RFTAYSASISDSNAGEDSSTPVFCARPEFRLLLGEPRGESAYAMLKLCHILICGPDRSLT
LDAAFSPTSLCASGSRYLMSCLKEVSALLLHRGDVIAERIGSTGQASGAELGDFMMLQIV
NRNALILRHFLNIGHIHPEELYRLLLTLLGELSTFGDDSRRPRLESSYQHSDQGATFRSV
MLAIRQMLSMVLEQHAQELELQPRQYGVLVSPRVDSELLGAASFVLAARAHCDAEELRLR
LPSHLKIGSVESIRELVGLHLPGIRLRPLPVAPRQIPFHAAKTYFVLDLDARERETIDKS
GGFAFHVSGEFPGLELQFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacacaaggtcatctggcaggaaggcatgttgttgcgtccacagcacttccag
cataacgaccgttattacgatcatcagttaagggttcgcactcgtttggcaggcccttac
aactggggattcaccgcagtggaaatcgatccgcaatttctggggtcgggccagatcgtt
cttgctcatgcctcgggcatcctgccggacggcagcgttttcgatatacgcgatcatgac
acgccactagttttggacatcccggccaatacctcaaacatggcggtgtacattgccttg
ccgatagtagcaggcaattgcgttgaggcacgcggtcatgaacagcctgacgctgtgacg
cgcttcacagcctattcagccagtatttctgattcaaacgccggggaagacagttcgaca
ccggtcttctgtgcacggccggaatttcgattgttactgggcgagcccaggggcgaaagc
gcgtacgcgatgctcaagctgtgtcatatccttatctgtggccctgacaggtcgctaaca
ctggatgcggcattttctcccacgtccctgtgcgccagtggctcccgttatctgatgtcc
tgtctgaaggaggtttcagctctgcttctccaccgcggagacgtgattgccgaacgaatc
ggttcgacggggcaggcgagcggggcggaactgggtgatttcatgatgctgcagatcgtc
aaccgcaatgcgttgatacttcggcactttctgaatatcgggcatatacatccggaagag
ctgtatcggttattgctgacgctgttgggcgagctgtcgacgtttggcgatgacagccgc
cgtcctcgcttggagagcagttatcagcacagtgatcagggcgcaacgttcaggagcgtg
atgctcgctattcggcagatgttgtcgatggtgcttgaacagcatgcgcaggaactcgag
ttacagccccggcagtacggtgttctggtgtcgccgcgagtggacagcgagttgctgggg
gctgcctcgtttgtcctcgctgcgcgtgcgcactgcgatgctgaagagctgcgtctgcga
ttgccttcacacctcaaaataggttctgtggaaagtattcgcgagctggtgggcttgcac
ttgccaggcattcgccttcggccactgcctgtggctccgcggcagattccgtttcacgcc
gccaagacctacttcgttctcgacctcgacgcgcgggagcgagaaacaattgataagtcc
ggaggttttgcctttcacgtttcaggcgagtttcccggacttgaattgcagttctgggcg
atcagaaattga
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