Pseudomonas coronafaciens pv. oryzae: POR16_13160
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Entry
POR16_13160 CDS
T08147
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
POR16_13160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcof02000
]
POR16_13160
Transporters [BR:
pcof02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
POR16_13160
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
DUF7035
Motif
Other DBs
NCBI-ProteinID:
QGL57223
LinkDB
All DBs
Position
complement(2911914..2913551)
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AA seq
545 aa
AA seq
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MTDTKIDSQLISGQESLRVFESLNRDISRRSALQMLGVAGVAAAGTGSLFGAAGKLFADE
AAAPVKGKPGGRIRVAGMNSSTADTLDPAKGSGSTDYTRHFMFYNGLTRFDSRMIPQLEL
AERCETTDATLWVITLRKEVTFHNGKSLTAADVVFSLLRHKDPIAGSKVLSLAEQFSEVK
AISESEVQIRLSGPNAELMSILAVSHFLIVPEGTTDFSLGIGTGPFKVKEFKPGVRSIAV
RNIQYWKPGLPYLDEIEFIGIADEPSRINALLSGDVHITNEVDPRSTVRIKASNTHRVIS
SPSGNYTDLIIRQDQMPGKSPEFTLAMKYLLDREQIVSAVFRGFAVVGNDHPISPGSRYF
NVDLPQRVYDPEKAKFLLKKAGIESISMPVYAAPAATGSVDMAVLLQQSAKQAGLKLDVN
RMPSDGYWSNHWAKHPLSFGNINPRPNADVMFSQFFKSNAPWNESAWKNEKFDQLLVLAR
AETDEAKRSTMYADMQALVHEHCGIGVPVFISNIDGIDQRIKGYGSNPLGGFMGYMFAEQ
VWLDA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccaagatcgactcccaactgatcagcggccaggaaagcctgcgcgtcttc
gaaagccttaaccgtgatatttctcggcgcagcgcgttgcaaatgctaggagtcgccggt
gtcgcggccgccggaaccggcagtctattcggcgctgccgggaagctgttcgcggacgag
gccgcagcccccgttaaaggcaagccgggcgggcggattcgcgtcgcgggcatgaacagt
tcaactgccgacaccctcgatcccgccaagggttccggttctactgattacactcggcat
ttcatgttttataacggtttgacgcgtttcgacagtcgtatgatcccgcaattggagttg
gccgagcgctgtgaaaccaccgacgccacactttgggtgatcacccttcgaaaagaggtg
accttccacaatggcaagtccctgacggcggccgacgtggtgttttctttattacggcac
aaggatcccatcgcaggctccaaagtcctgtcgctggcagagcagttcagcgaggtcaag
gcgatcagcgaaagtgaagtgcagatacgtctcagcggcccgaacgccgagctgatgtcg
attctcgcagtgtcgcattttctgattgttcccgagggcaccaccgacttcagcctgggc
atcggcacggggccgttcaaggtcaaggagttcaagcccggcgtgcgctcgattgccgta
cgcaatatccaatactggaaaccgggtttgccttacctcgatgagatcgaattcatcggt
attgccgacgaaccttcaaggatcaacgcgctgctgtcaggcgatgtgcatatcaccaat
gaagtcgatccgcgctccacagtacgcatcaaggccagcaacactcacagggtgatttcg
tcgccgtctggaaactacaccgatctgatcattcgccaggatcaaatgcctggtaaaagc
ccggaattcactttggcgatgaaatacctgctggatcgtgagcagattgtatctgccgtc
ttcaggggtttcgccgtggtcggtaacgatcatccaatttcgcctggttcgcgttacttc
aatgttgatctgccacaacgagtttacgacccggaaaaagccaagttccttctgaaaaag
gccggtattgagagcatcagcatgccggtgtacgctgcgccagctgcgaccggctcggtg
gatatggcggttctcttgcaacaatcggcgaaacaggccgggctcaagctagatgtcaac
cgcatgcccagtgacggctattggtccaatcactgggcgaagcatccgctgagtttcggc
aacatcaacccacggccgaacgccgacgtaatgttctcgcagttcttcaagtcgaacgcg
ccgtggaacgagtccgcctggaagaacgagaagttcgaccagttgctggtgttggcccgt
gctgaaaccgatgaggccaagcgcagcacaatgtatgcggacatgcaggcactggtgcac
gaacattgcggcatcggtgttccggtcttcatcagcaatattgacggtatcgatcagcgc
atcaaaggctacggcagcaacccgctgggtggtttcatgggctacatgtttgcagagcaa
gtctggctggatgcttaa
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