Pseudomonas coronafaciens pv. oryzae: POR16_13535
Help
Entry
POR16_13535 CDS
T08147
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcof03000
]
POR16_13535
Transcription factors [BR:
pcof03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
POR16_13535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
HTH_20
MarR
NirdL-like_HTH
MarR_2
HTH_IclR
Sigma70_r4
Sigma70_r4_2
HTH_5
HTH_27
HTH_Crp_2
TrmB
LexA_DNA_bind
HTH_23
HTH_31
DUF7343
HTH_Tnp_ISL3
HTH_1
DnaD_N
Rrf2
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QGL57292
LinkDB
All DBs
Position
3001068..3001535
Genome browser
AA seq
155 aa
AA seq
DB search
MQLKLSPIDRKILRLLQHDANLSAAEIAERVELSQSPCWRRIHRLQEDGVIERTVALLST
RKLGLSMTVFVEVKLSGHGRRYLAEFEEAIIGHPEVLECYTMAGGMDFMLKVVAHDIASY
ERFLRDHLLQLPHVHEAHSNIAMSTVKRTTELPLD
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaattgagccccatcgatcgaaagattctccgtctgttgcagcatgacgcc
aatctgtctgcggcagagatagcagaacgcgtagaactgtcccagtcgccctgctggcgg
cgcatccaccggcttcaggaggacggggtgatcgagcgcaccgtcgccttgctcagcacc
cgaaaactcgggcttagcatgaccgtcttcgtcgaggtcaagctttcaggacatggccgg
cggtatctggccgagttcgaagaggcaatcatcggccaccccgaggtactggagtgctac
accatggcgggcgggatggatttcatgctcaaggtggtggcgcatgacattgccagctac
gagcgctttttacgtgatcatctgctgcaactcccccacgtgcatgaagcacattccaac
atcgccatgagtacggtgaaacgcaccacggaattgccattggactga
DBGET
integrated database retrieval system
