Pseudomonas coronafaciens pv. oryzae: POR16_14205
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Entry
POR16_14205 CDS
T08147
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof02010
ABC transporters
pcof03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
POR16_14205
03070 Bacterial secretion system
POR16_14205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcof02000
]
POR16_14205
02044 Secretion system [BR:
pcof02044
]
POR16_14205
Transporters [BR:
pcof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
POR16_14205
Secretion system [BR:
pcof02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
POR16_14205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_18
AAA_29
DUF87
PRK
MeaB
AAA_30
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QGL59648
LinkDB
All DBs
Position
complement(3174727..3176883)
Genome browser
AA seq
718 aa
AA seq
DB search
MTATEPAAASNDAVPIDTGLASLVMLARFHQVSASPEQLAHEFSSGEALQPSELLLAAKK
LGLKAKFAKVAIDRLDRTPLPAIAQGEDGNFFIVARLDQGKVLIHDPRSQRPEIITIEDL
AGRWAGQLLFIRAGAGITCESSRFDFTWFIPAVVKYRKLLGEVLLISFVLQIFSLITPLF
FQVVMDKVLVHHGLTTLDVIAIGLAGVMLFESSLSGLRSYVFAHTASRIDVELGSKLFRH
LITLPLSYFQARRVGDSVARMRELENIRSFITGNAITLLLDVLFSAVFIAVMFYYSGWLT
LIVLLSLPMYILVSVCITPLLRARLNDSFARGAENQAFLVETVNGIDTLKSMAVEPQAVR
KWDNQLAGYVAAGFKTQTLSTIANESVSLIGKLVTVATLWLGARLVIDGQLSVGQLIAFN
MLAGRVAQPIMRLAQLWTNFQQTGVSVQRLGDILNTRTELTQATRSSLPPIKGRIEFDEV
HFRYRPDGSEILRGISLAIEAGEVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVDGMDL
ALADVSSLRRQIGVVLQDNMLFNRSIRENIALSDPGVPLEAVIEVAQLAGAHDFILELPE
GYDTMVGEHGASLSGGQRQRIAIARALMGNPRILIFDEATSALDYESERIVQQNMKSICT
GRSVIIIAHRLSAVRDANRIVVVDRGQIVEQGTHAELLNHQAGHYSRLHRLQHGGGHG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccactgagccagccgcagcttccaatgacgccgtaccaatagataccggactg
gcatcgctcgtgatgctggctcgttttcatcaggtgtcagcatcccctgagcaactagcc
cacgaattctcctcaggcgaagctctccagccatccgagctgcttcttgctgcaaaaaaa
ttgggcctcaaggcgaagtttgcaaaagtggctatcgataggctggatcgcacgccttta
cctgcaatagcacagggcgaagacgggaatttttttatcgttgcgcgtctagatcagggc
aaggtgctcattcatgaccctcgatctcagcgccccgagatcataacgattgaggacttg
gctggtcgctgggctggccaactgctctttataagagctggtgcaggaatcacttgtgag
tcctctcgcttcgatttcacctggtttattccagcggttgttaaataccgaaagcttctc
ggcgaggtactgctgatttctttcgttttacagattttctcgcttatcaccccgcttttc
tttcaggtcgtcatggacaaggtgctggtgcaccacggattgaccacgctggatgtgatc
gcgattggtctggcgggtgtgatgctgttcgagtctagtctatcgggcttgcgatcctat
gtgtttgcccataccgccagccgaatcgacgtcgagttaggctccaagttattcaggcat
ctgatcacactgccgctttcctattttcaagcgcgacgggtaggtgattcggtagcaagg
atgcgagagctcgaaaacattcggagttttatcacaggcaacgccattaccttgcttctc
gatgttttattctctgcggtcttcatcgctgtgatgttctactacagcggctggctgacg
ctgatcgttctcttgtcactcccgatgtacatcctagtttcggtttgcattacaccgtta
ttgagggcgcgcctgaatgacagttttgctcggggtgcggaaaaccaagcatttctagta
gagacggttaacggtatcgacaccctgaaatcgatggccgttgagcctcaagctgttcgg
aaatgggacaaccagttagcggggtacgtggcagcagggtttaaaactcagaccttgtca
accatcgccaacgagagcgtgtcgttgattggtaaattagtgactgtggccacgctttgg
ttgggggcccgactggtcatcgacggtcagctttcagttgggcaactgattgccttcaat
atgcttgctgggcgtgttgcccagccaatcatgcgcctggctcaactttggacaaacttt
cagcaaaccggcgtttctgtgcagcggctgggggacatccttaacacccggactgaattg
acccaggcaactcgtagttcgctcccgcccataaaggggcgtatagagttcgatgaggtt
cattttcgttatcgcccggatggctctgaaattcttcggggcatcagcctagctatcgaa
gctggcgaagttatcggtgtcgttggaagatctggctcgggcaaaagtacgctgacaaga
ttgcttcaacgcctctatgtgcctgagcgggggcgtgtcctagtcgatggaatggacttg
gcgctggcggatgtttcttcgttgcgtcgacagattggtgtagtgctgcaagacaatatg
ctgttcaaccgtagcatccgggaaaacatcgccttaagtgacccaggcgttccactggaa
gccgtgattgaagtcgcacagctggccggagcgcatgattttattcttgagcttcccgag
ggctacgacactatggttggtgagcacggcgcctcactgtcgggtggacagcgtcagcgt
atcgctattgcccgggcgcttatgggtaaccctcgcattcttatttttgatgaagcaacg
agtgctttggattacgaatctgagcgcattgttcagcagaatatgaaatctatctgcacg
ggacgctctgtcatcatcattgcacaccgcttatcagctgtccgcgatgcgaatcggatt
gtcgtcgtcgatcgagggcaaatcgttgaacagggcacacacgccgagctgctgaaccat
caggccggacactactctcgtctccatcgcttgcaacacggaggtggtcatggctga
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