Pseudomonas coronafaciens pv. oryzae: POR16_15010
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Entry
POR16_15010 CDS
T08147
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcof
Pseudomonas coronafaciens pv. oryzae
Pathway
pcof00071
Fatty acid degradation
pcof00280
Valine, leucine and isoleucine degradation
pcof00310
Lysine degradation
pcof00362
Benzoate degradation
pcof00380
Tryptophan metabolism
pcof00410
beta-Alanine metabolism
pcof00640
Propanoate metabolism
pcof00650
Butanoate metabolism
pcof00907
Pinene, camphor and geraniol degradation
pcof00930
Caprolactam degradation
pcof01100
Metabolic pathways
pcof01110
Biosynthesis of secondary metabolites
pcof01120
Microbial metabolism in diverse environments
pcof01200
Carbon metabolism
pcof01212
Fatty acid metabolism
Module
pcof_M00087
beta-Oxidation
pcof_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
POR16_15010 (fadB)
00650 Butanoate metabolism
POR16_15010 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
POR16_15010 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
POR16_15010 (fadB)
00310 Lysine degradation
POR16_15010 (fadB)
00380 Tryptophan metabolism
POR16_15010 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
POR16_15010 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
POR16_15010 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
POR16_15010 (fadB)
00930 Caprolactam degradation
POR16_15010 (fadB)
Enzymes [BR:
pcof01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
POR16_15010 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
POR16_15010 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
POR16_15010 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
POR16_15010 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QGL57555
LinkDB
All DBs
Position
complement(3347155..3349320)
Genome browser
AA seq
721 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVTS
GKDSFIVGADITEFVENFKLPEAELVAGNLEANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADFRVMSSSARIGLPEVKLGLYPGFGGTVRLPRIVGADNAIEWIASGKENAAEDAL
KVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMAKTSAAHSLIGLFLNDQEL
KKKAKGYDKVARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVG
ENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQKNGKGFYAYEADKKGKP
KKVNDPAVLDVLKPIVYEQREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADRYAELGALYQPTAKLREMALNGQSFFGQASSE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcaccctcaatgaattg
cgccaggcggtcgatgccatcaaggcagatgcatcggtcaagggcgtgattgtcaccagc
ggcaaggattcgttcattgtcggtgccgacatcaccgagttcgtcgagaacttcaagttg
ccggaagccgaactggttgccggcaatctggaagccaacagaatcttcagcgatttcgaa
gacttgggcgtacctaccgtcgtagccatcaatggcatcgcgctgggcggtggtctggaa
atgtgtctggccgccgatttccgtgtcatgtccagcagcgcccgcattggcctgccagaa
gtcaaactgggtttgtatccgggcttcggtggcaccgttcgcctgccgcgcatcgtcggc
gccgataacgcgatcgagtggattgcatcgggcaaggaaaacgcagcagaagacgctctg
aaagtcggtgctgtcgatgctgtcgtggcaccggagaagcttcaggcggccgcacttgac
ctcatccagcgcgccatttccggcgagttcgattacaaggccaaacgccagcccaaactg
gaaaagctcaaactgaatgccatcgagcagatgatggctttcgaaacggccaaaggcttc
gtcgcgggtcaggccggtcctaattacccggcccctgtagaagccatcaagaccattcag
aaagccgccaatttcggtcgcgacaaagcgctggaagtcgaagctgccggcttcgtcaag
atggccaagacctcggcagctcacagcctgatcggtcttttcctgaacgatcaggagctg
aaaaagaaagccaagggctacgataaggttgcccgtgacgtgaaacaggctgcagtactg
ggcgctggcatcatgggcggtggcattgcctatcagtcagcggtcaaaggtacgccgatc
ctgatgaaggacatccgtgaagaggccattcaactgggcttgaacgaagcgtccaagctg
ctgggcggtcgccttgaaaaaggccgtctcacggcagcgaagatggccgaagcgctgaat
gcgatccgtcctacactgtcgtatggcgatttcggcaatgtcgatctggtggtcgaagcg
gtagtcgaaaaccccaaggtcaaacaggccgtgctggctgaagttgaagccaatgtgggc
gagaacaccattctggcgtccaacacttctaccatttcgatcagcctgctggcccaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccc
ctggtggaagtcattcgtggcgagaagtccagcgaggaggcagttgctaccactgttgct
tatgcccggaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttctggtt
aatcgtgtgttgttcccttatttcggtggtttcgccaggctggtcagcgcgggtgtggat
ttcgtgcgcatcgacaaggtcatggagaagttcggctggccgatggggcctgcctatctg
atggacgtggtcggtatcgacaccgggcaccacggtcgagacgttatggccgaaggcttt
ccggaccgtatgaaggatgaccgtcgctctgccatcgacgcgctttacgaggccaatcgt
ctgggccagaagaacggcaagggcttctatgcctacgaggcggacaagaagggcaagccg
aagaaggtcaacgacccagccgtgcttgatgtgctcaagccgattgtctacgagcagcgt
gaagtgagcgacgaagacatcatcaactggatgatgatcccgctttgcctggaaacggtc
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgatatgggtctgatctac
ggtattggtttccctccgttccgcgggggggcgttgcgctacatcgactctatcggtgtg
gccgaattcgttgccctggccgaccgatatgccgagctgggtgccctgtatcaaccgacc
gcgaagcttcgtgagatggcccttaatggccagagcttctttggtcaagcgtcttccgag
gaatga
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